RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 OR7D4Q8NG98 312 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 MAIP1Q8WWC4 291 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 FAM3CQ92520 227 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 P3H4Q92791 437 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 ARHGEF2Q92974 986 aaKnown RBP16.17■□□□□ 0.18
USP40-206ENST00000443711 ALG14Q96F25 216 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 HERPUD2Q9BSE4 406 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 SPON2Q9BUD6 331 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 SLC39A8Q9C0K1 460 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 LRRC19Q9H756 370 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 VPS28Q9UK41 221 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 HPCAL4Q9UM19 191 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 HEY1Q9Y5J3 304 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 OR51B4Q9Y5P0 310 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 A0A0A0MRY4 1105 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 A0A0D9SEW6 157 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 TBC1D3BA6NDS4 549 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 APOC4-APOC2K7ER74 178 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 FANCGO15287 622 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 NCAM2O15394 837 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 TIMM44O43615 452 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 MFSD11O43934 449 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 APOC2P02655 101 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 POLR2EP19388 210 aaKnown RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 MX2P20592 715 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 ACVRL1P37023 503 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 GBE1Q04446 702 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 GRSF1Q12849 480 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP40-206ENST00000443711 PON2Q15165 354 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 GEN1Q17RS7 908 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 PITRM1Q5JRX3 1037 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 IL31Q6EBC2 164 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 ZNF852Q6ZMS4 543 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 ZNF354CQ86Y25 554 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 LRRC49Q8IUZ0 686 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 APCDD1Q8J025 514 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 RASGEF1CQ8N431 466 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 TERB1Q8NA31 727 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 COG1Q8WTW3 980 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 HMCESQ96FZ2 354 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 NAP1L3Q99457 506 aaPredicted RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 ACE2Q9BYF1 805 aaPredicted RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 ATP13A1Q9HD20 1204 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 DTLQ9NZJ0 730 aa16.16■□□□□ 0.18
USP40-206ENST00000443711 INTS6Q9UL03 887 aaKnown RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 TTC7AQ9ULT0 858 aaPredicted RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 MRPS17Q9Y2R5 130 aaKnown RBP16.16■□□□□ 0.18
USP40-206ENST00000443711 DFFAO00273 331 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 KDELR3O43731 214 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 ZNF500O60304 480 aaPredicted RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 FGGP02679 453 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 DRD1P21728 446 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 TNFRSF4P43489 277 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 PAPOLAP51003 745 aaKnown RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 SULT2A1Q06520 285 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 MESP2Q0VG99 397 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 GALNT2Q10471 571 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 SLC10A2Q12908 348 aaPredicted RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 KLF1Q13351 362 aaPredicted RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 SERINC3Q13530 473 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 EIF4HQ15056 248 aaKnown RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 PDK1Q15118 436 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 LONRF2Q1L5Z9 754 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 FUT11Q495W5 492 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 TMEM196Q5HYL7 178 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 NPNTQ6UXI9 565 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 ADIPOR2Q86V24 386 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 DCAF4L2Q8NA75 395 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 UCMAQ8WVF2 138 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 TTC17Q96AE7 1141 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 FBRSL1Q9HCM7 1045 aaKnown RBP16.15■□□□□ 0.18
USP40-206ENST00000443711 ELOVL2Q9NXB9 296 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
USP40-206ENST00000443711 NYNRINQ9P2P1 1898 aaKnown RBP16.14■□□□□ 0.17
USP40-206ENST00000443711 TCRBV7S2A1N4TA0A589 114 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 KRBA1A5PL33 1030 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 CBX4O00257 560 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 PGRMC1O00264 195 aaKnown RBP16.14■□□□□ 0.17
USP40-206ENST00000443711 ASLP04424 464 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 ATP5BP06576 529 aaKnown RBP16.14■□□□□ 0.17
USP40-206ENST00000443711 STARD6P59095 220 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 E2F5Q15329 346 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 FSTL4Q6MZW2 842 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.17
USP40-206ENST00000443711 TP53INP2Q8IXH6 220 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 SIX5Q8N196 739 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 ATPAF2Q8N5M1 289 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 NETO2Q8NC67 525 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 ACTRT1Q8TDG2 376 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 EDAQ92838 391 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 ACDQ96AP0 544 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 HAUS1Q96CS2 278 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 MS4A14Q96JA4 679 aa16.14■□□□□ 0.17
USP40-206ENST00000443711 NELL2Q99435 816 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms