RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TNFSF14O43557 240 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 BNIP3LO60238 219 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 PAGE1O75459 146 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 TPM2P07951 284 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 RHOCP08134 193 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 CD38P28907 300 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 NUDT1P36639 197 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 PLK1P53350 603 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 CDH4P55283 916 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 KRT83P78385 493 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 IL9RQ01113 521 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 DEUP1Q05D60 604 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 CCDC157Q569K6 752 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 FAM102AQ5T9C2 384 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 CXorf57Q6NSI4 855 aaKnown RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 PRPF39Q86UA1 669 aaKnown RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 FAM71AQ8IYT1 594 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 GALNT15Q8N3T1 639 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 OXR1Q8N573 874 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 WDTC1Q8N5D0 677 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 AADATQ8N5Z0 425 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 BAHD1Q8TBE0 780 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 PTPRN2Q92932 1015 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 ELF4Q99607 663 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 C2orf49Q9BVC5 232 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 NUP62CLQ9H1M0 184 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 CCDC86Q9H6F5 360 aaKnown RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 WDCPQ9H6R7 721 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 A0A1B0GTQ1 180 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 KCNK3O14649 394 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 MAGEC1O60732 1142 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 F9P00740 461 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 ITGAVP06756 1048 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 PNMA6AP0CW24 399 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 CLCN1P35523 988 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 GGCXP38435 758 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 ARRB1P49407 418 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 SCAPQ12770 1279 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 EIF4EBP2Q13542 120 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 DRAP1Q14919 205 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 SLCO6A1Q86UG4 719 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 ERICH1Q86X53 443 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 C18orf8Q96DM3 657 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 PIGVQ9NUD9 493 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 AJAP1Q9UKB5 411 aaPredicted RBP12.1□□□□□ -0.47
TTC28-203ENST00000442232 BTBD3Q9Y2F9 522 aa12.1□□□□□ -0.47
TTC28-203ENST00000442232 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
TTC28-203ENST00000442232 GOLGA8SH3BPF8 625 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 ATP9BO43861 1147 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
TTC28-203ENST00000442232 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
TTC28-203ENST00000442232 VAV1P15498 845 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 CYP11B1P15538 503 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 SCNN1AP37088 669 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
TTC28-203ENST00000442232 DLG2Q15700 870 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 DPCR1Q3MIW9 517 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
TTC28-203ENST00000442232 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 TAF3Q5VWG9 929 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 NAPEPLDQ6IQ20 393 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 Q6ZVU0 165 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 PIP4K2CQ8TBX8 421 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 ORAI3Q9BRQ5 295 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 DMTF1Q9Y222 760 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 DOCK4Q8N1I0 1966 aa12.09□□□□□ -0.47
TTC28-203ENST00000442232 ANKRD11Q6UB99 2663 aaPredicted RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 PKD1L2Q7Z442 2459 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 RTN2O75298 545 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 ADCY5O95622 1261 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 MAT2AP31153 395 aaKnown RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 DRD3P35462 400 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms