RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CFIP05156 583 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 KRT16P08779 473 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 NQO1P15559 274 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CORO1AP31146 461 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 VCPP55072 806 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZXDAP98168 799 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 IFFO1Q0D2I5 559 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 UAP1L1Q3KQV9 507 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 LY6G5CQ5SRR4 150 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ALKAL1Q6UXT8 129 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRABD2AQ86V40 505 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM124AQ86V42 546 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CPA5Q8WXQ8 436 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 NKD2Q969F2 451 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SKA1Q96BD8 255 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC7A6OSQ96CW6 309 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 VWCEQ96DN2 955 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 VCPIP1Q96JH7 1222 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAGEB18Q96M61 343 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF570Q96NI8 536 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 HNRNPABQ99729 332 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CXorf56Q9H5V9 222 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 INTS9Q9NV88 658 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SFMBT1Q9UHJ3 866 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM186AA6NE01 2351 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 LEFTY2O00292 366 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 LIASO43766 372 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 NARSO43776 548 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CALB1P05937 261 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ADH5P11766 374 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 KRT3P12035 628 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PSMA2P25787 234 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 DGKGP49619 791 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 NRLP54845 237 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 TNK2Q07912 1038 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZBTB6Q15916 424 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SNCBQ16143 134 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 EFHC2Q5JST6 749 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 MFSD6LQ8IWD5 586 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 LGI2Q8N0V4 545 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 NIPA2Q8N8Q9 360 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF557Q8N988 423 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CXorf38Q8TB03 319 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FGF14Q92915 247 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC46A2Q9BY10 475 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 RC3H2Q9HBD1 1191 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 TMLHEQ9NVH6 421 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 INVSQ9Y283 1065 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF510Q9Y2H8 683 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF638Q14966 1978 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 KANSL1LA0AUZ9 987 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CFAP73A6NFT4 308 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 A8MUI8 341 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CILPO75339 1184 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ABLIM3O94929 683 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 EPHX1P07099 455 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM163BP0C2L3 166 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 MYBL1P10243 752 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCR1P32246 355 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 GPX6P59796 221 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRKCQQ04759 706 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PPP1R2P3Q6NXS1 205 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CYP4V2Q6ZWL3 525 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PDCD6IPQ8WUM4 868 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 HSFY1Q96LI6 401 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ELAC2Q9BQ52 826 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 VN1R3Q9BXE9 311 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRDM16Q9HAZ2 1276 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 MRPL47Q9HD33 250 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FGFR1OP2Q9NVK5 253 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 E7ESA3 106 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 WFS1O76024 890 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLCO1A2P46721 670 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CAV1Q03135 178 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SIM2Q14190 667 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 KYNUQ16719 465 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 DGKKQ5KSL6 1271 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 RNF187Q5TA31 235 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SEL1L2Q5TEA6 688 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 TXNRD3NBQ6F5E7 133 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRIM72Q6ZMU5 477 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC91Q7Z6B0 441 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 AGGF1Q8N302 714 aaeCLIP7.57□□□□□ -1.29e-7■■□□□ 13.8
CDC42BPA-208ENST00000442054 ATL2Q8NHH9 583 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 EXD1Q8NHP7 514 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 AGAP11Q8TF27 550 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 ARHGEF2Q92974 986 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAXDC2Q96IV6 333 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 MYCBPQ99417 103 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CENPHQ9H3R5 247 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CNGB3Q9NQW8 809 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 WNT16Q9UBV4 365 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FETUBQ9UGM5 382 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms