RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 ARHGAP36Q6ZRI8 547 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 DENND1CQ8IV53 801 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 LGI2Q8N0V4 545 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 CNTD1Q8N815 330 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 FAM76AQ8TAV0 307 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 MRPS31Q92665 395 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 SIGLEC10Q96LC7 697 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 PPP1R2P1Q96PQ5 205 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 ADAM21Q9UKJ8 722 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 SHROOM3Q8TF72 1996 aa17.4■□□□□ 0.38
TMEM39B-203ENST00000441402 RASA4BC9J798 803 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 RASA4O43374 803 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 BANF1O75531 89 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 ARHGEF15O94989 841 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 FGF19O95750 216 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 AP2A1O95782 977 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 AGTP01019 485 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 MBL2P11226 248 aaPredicted RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 ELK3P41970 407 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 MMP13P45452 471 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 CDH4P55283 916 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 ERVK-21P61565 698 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 SLC7A9P82251 487 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 RABGAP1LQ5R372 815 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 PPM1LQ5SGD2 360 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 C3orf62Q6ZUJ4 267 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 ANKMY2Q8IV38 441 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 RIBC1Q8N443 379 aaPredicted RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 PDCD7Q8N8D1 485 aaKnown RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 MYEOVQ96EZ4 313 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 TGS1Q96RS0 853 aaKnown RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 GORASP1Q9BQQ3 440 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 CEP41Q9BYV8 373 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 STMN4Q9H169 189 aaPredicted RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 AGO1Q9UL18 857 aaKnown RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 PCDHA11Q9Y5I1 949 aa17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 NYNRINQ9P2P1 1898 aaKnown RBP17.39■□□□□ 0.37
TMEM39B-203ENST00000441402 TLDC2A0PJX2 215 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 SOBPA7XYQ1 873 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 GRM6O15303 877 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 AVILO75366 819 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 CLDN11O75508 207 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 PEX11BO96011 259 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 LMAN1P49257 510 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 GABPB1Q06547 395 aaPredicted RBP17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 HP1BP3Q5SSJ5 553 aaPredicted RBP17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 KCTD16Q68DU8 428 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 CHST9Q7L1S5 443 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 IGDCC3Q8IVU1 814 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 AGGF1Q8N302 714 aaeCLIP17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 ARL14EPQ8N8R7 260 aaPredicted RBP17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 MICAL1Q8TDZ2 1067 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 ADAMTS19Q8TE59 1207 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 EPS8L3Q8TE67 593 aaKnown RBP17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 HMCESQ96FZ2 354 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 AGAP3Q96P47 875 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 FCRL5Q96RD9 977 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 MAGEH1Q9H213 219 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 VPS37BQ9H9H4 285 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 EURLQ9NYK6 297 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 RSPH14Q9UHP6 348 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 LGALS13Q9UHV8 139 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 RABGEF1Q9UJ41 708 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 CHD5Q8TDI0 1954 aa17.38■□□□□ 0.37
TMEM39B-203ENST00000441402 H3BNC9 293 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 RGS16O15492 202 aaPredicted RBP17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 GREM1O60565 184 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 RAMP2O60895 175 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 CDH16O75309 829 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 HNRNPA1P09651 372 aaKnown RBP eCLIP17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 MYOGP15173 224 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 NFKB1P19838 968 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 OR1E1P30953 314 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 RENBPP51606 427 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 IL10RBQ08334 325 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SERINC3Q13530 473 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 PRPSAP1Q14558 356 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 POLD3Q15054 466 aaPredicted RBP17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SHHQ15465 462 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 LONRF1Q17RB8 773 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 TTC39BQ5VTQ0 682 aaPredicted RBP17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 TXNDC8Q6A555 127 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 Q6ZNB5 142 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 CYS1Q717R9 158 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 CCNJLQ8IV13 435 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 FAM217AQ8IXS0 508 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 TEX26Q8N6G2 289 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SLC22A17Q8WUG5 538 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 WBP2Q969T9 261 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 SLC22A12Q96S37 553 aa17.37■□□□□ 0.37
TMEM39B-203ENST00000441402 CYP2S1Q96SQ9 504 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms