RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IQUBQ8NA54 791 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC112Q8NEF3 446 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPATA20Q8TB22 786 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC12Q8WUD4 166 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 DHX58Q96C10 678 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 RRP36Q96EU6 259 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 APIPQ96GX9 242 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 EPSTI1Q96J88 318 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CDK5RAP3Q96JB5 506 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SCLT1Q96NL6 688 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 GSDMAQ96QA5 445 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC29A3Q9BZD2 475 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 TMX4Q9H1E5 349 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 HSD3B7Q9H2F3 369 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PDCL3Q9H2J4 239 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZMAT3Q9HA38 289 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 C6orf50Q9HD87 102 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SARS2Q9NP81 518 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 NRIP3Q9NQ35 241 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ARHGEF3Q9NR81 526 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PCDHA6Q9UN73 950 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 STX8Q9UNK0 236 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 GTF2A1LQ9UNN4 478 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ATP6V0A2Q9Y487 856 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PCDHGB3Q9Y5G1 929 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PCDHA3Q9Y5H8 950 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYH15Q9Y2K3 1946 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYO5AQ9Y4I1 1855 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 GAKO14976 1311 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 FLT1P17948 1338 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 KAT6BQ8WYB5 2073 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CFAP69A5D8W1 941 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SMCO2A6NFE2 343 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 USP27XA6NNY8 438 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 E9PLN8 166 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 hCG_1984214I3L0E3 225 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 M0QYG6 137 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 LAD1O00515 517 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC16A3O15427 465 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CYTH3O43739 400 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 LY75O60449 1722 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 GOLGA8HP0CJ92 632 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 VEGFAP15692 232 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TSHRP16473 764 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF18P17022 549 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ABCB4P21439 1286 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 DRD4P21917 467 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 GNA11P29992 359 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 GRK6P43250 576 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 KCNJ5P48544 419 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 NOVP48745 357 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPM1FP49593 454 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 NAPAP54920 295 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TNFAIP2Q03169 654 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPAG1Q07617 926 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF543Q08ER8 600 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBX2Q13207 712 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ORC2Q13416 577 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 NONOQ15233 471 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SYCP1Q15431 976 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ELF2Q15723 593 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBCCQ15814 346 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 IL17AQ16552 155 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 FILIP1LQ4L180 1135 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 EMC10Q5UCC4 262 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 IZUMO3Q5VZ72 239 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 RRAGBQ5VZM2 374 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TAF2Q6P1X5 1199 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TLDC1Q6P9B6 456 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC174Q6PII3 467 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 AMIGO2Q86SJ2 522 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 USP37Q86T82 979 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 RASAL3Q86YV0 1011 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF713Q8N859 430 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC44A5Q8NCS7 719 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SEMA6DQ8NFY4 1073 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZC3H10Q96K80 434 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 C16orf45Q96MC5 204 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CTAGE1Q96RT6 745 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 VKORC1Q9BQB6 163 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPZ1Q9BXG8 430 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZMYND12Q9H0C1 365 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CERS4Q9HA82 394 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 ARFGAP3Q9NP61 516 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SAMSN1Q9NSI8 373 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SERTAD4Q9NUC0 356 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 RMND1Q9NWS8 449 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TRMT1Q9NXH9 659 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 BARHL2Q9NY43 387 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SEC63Q9UGP8 760 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SWAP70Q9UH65 585 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 PGAP2Q9UHJ9 254 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CDC23Q9UJX2 597 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 CORO2BQ9UQ03 480 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 SHOC2Q9UQ13 582 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 NFE2L3Q9Y4A8 694 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 POLR2AP24928 1970 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 TNRC6CQ9HCJ0 1690 aaKnown RBP3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 A0A1B0GUL6 1792 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms