RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ZKSCAN5Q9Y2L8 839 aa18.19■□□□□ 0.5
CCDC188-201ENST00000439765 ASCC3Q8N3C0 2202 aaKnown RBP18.18■□□□□ 0.5
CCDC188-201ENST00000439765 RCCD1A6NED2 376 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 ALDH1A2O94788 518 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 HLA-EP13747 358 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 MZF1P28698 734 aaPredicted RBP18.18■□□□□ 0.5
CCDC188-201ENST00000439765 PTPRNQ16849 979 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 C11orf74Q86VG3 221 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 APCDD1Q8J025 514 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 OR52K2Q8NGK3 314 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 CTNNBL1Q8WYA6 563 aaPredicted RBP18.18■□□□□ 0.5
CCDC188-201ENST00000439765 C1orf74Q96LT6 269 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 MRPL47Q9HD33 250 aaKnown RBP18.18■□□□□ 0.5
CCDC188-201ENST00000439765 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.18■□□□□ 0.5
CCDC188-201ENST00000439765 TFR2Q9UP52 801 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 CHD5Q8TDI0 1954 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 LAMA1P25391 3075 aa18.18■□□□□ 0.5
CCDC188-201ENST00000439765 IGLV3-10A0A075B6K4 115 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.17■□□□□ 0.5
CCDC188-201ENST00000439765 TMEM191CA6NGB0 347 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ZSCAN12O43309 604 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 TIMM44O43615 452 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 CLDN11O75508 207 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 MOCS3O95396 460 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ATP5BP06576 529 aaKnown RBP18.17■□□□□ 0.5
CCDC188-201ENST00000439765 DLDP09622 509 aaKnown RBP18.17■□□□□ 0.5
CCDC188-201ENST00000439765 CTSOP43234 321 aaPredicted RBP18.17■□□□□ 0.5
CCDC188-201ENST00000439765 LIMK1P53667 647 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 CDH4P55283 916 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ZNF177Q13360 481 aaPredicted RBP18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ELF2Q15723 593 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 PLEKHG6Q3KR16 790 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 C5orf22Q49AR2 442 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 DAB2IPQ5VWQ8 1189 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ZNF662Q6ZS27 426 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 SLFN11Q7Z7L1 901 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 PGBD3Q8N328 593 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 NTAN1Q96AB6 310 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 ARHGEF26Q96DR7 871 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 LACRTQ9GZZ8 138 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 OR12D3Q9UGF7 316 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 PLA2G4CQ9UP65 541 aa18.17■□□□□ 0.5
CCDC188-201ENST00000439765 CACNA1EQ15878 2313 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 A0A0U1RQJ8 604 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 FAM72CH0Y354 149 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 NPC1O15118 1278 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 GDF9O60383 454 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 CYP1A2P05177 515 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 EPHX1P07099 455 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 GABRG2P18507 467 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 MPLP40238 635 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 SCAPQ12770 1279 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 ENPP2Q13822 863 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 STARD3Q14849 445 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 USP39Q53GS9 565 aaKnown RBP18.16■□□□□ 0.5
CCDC188-201ENST00000439765 EFHC2Q5JST6 749 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 ARTNQ5T4W7 220 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 ACBD5Q5T8D3 534 aaPredicted RBP18.16■□□□□ 0.5
CCDC188-201ENST00000439765 FAM72AQ5TYM5 149 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 FAM72DQ6L9T8 149 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 RWDD4Q6NW29 188 aaKnown RBP18.16■□□□□ 0.5
CCDC188-201ENST00000439765 FAM72BQ86X60 149 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 CACUL1Q86Y37 369 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 PYROXD2Q8N2H3 581 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 FNIP1Q8TF40 1166 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 NUP85Q9BW27 656 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 ZYG11BQ9C0D3 744 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 SLC6A17Q9H1V8 727 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 CD248Q9HCU0 757 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 INVSQ9Y283 1065 aa18.16■□□□□ 0.5
CCDC188-201ENST00000439765 DCLK1O15075 740 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 SYNCRIPO60506 623 aaKnown RBP18.15■□□□□ 0.5
CCDC188-201ENST00000439765 LRIG2O94898 1065 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 RHOCP08134 193 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 NDUFV2P19404 249 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 STK19P49842 368 aaPredicted RBP18.15■□□□□ 0.5
CCDC188-201ENST00000439765 E2F5Q15329 346 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 MANEALQ5VSG8 457 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 PMS2CLQ68D20 193 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 REXO1L1PQ8IX06 675 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 C12orf50Q8NA57 414 aaPredicted RBP18.15■□□□□ 0.5
CCDC188-201ENST00000439765 BTBD6Q96KE9 485 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 MUC3BQ9H195 1237 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 TMEM245Q9H330 911 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 VPS45Q9NRW7 570 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 KCND1Q9NSA2 647 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 VPS28Q9UK41 221 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 NEU3Q9UQ49 428 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 TBC1D30Q9Y2I9 924 aa18.15■□□□□ 0.5
CCDC188-201ENST00000439765 DCDC2BA2VCK2 349 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 DRGXA6NNA5 263 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 BTNL10A8MVZ5 291 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 RNF8O76064 485 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 ASLP04424 464 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 OR1E1P30953 314 aa18.14■□□□□ 0.5
CCDC188-201ENST00000439765 SLC12A1Q13621 1099 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms