RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RTL3Q8N8U3 475 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 SLC35G2Q8TBE7 412 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 TEKT4Q8WW24 435 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 RFFLQ8WZ73 363 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 NKD2Q969F2 451 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 MYO19Q96H55 970 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 PSMB7Q99436 277 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 SLC25A13Q9UJS0 675 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 MUC22E2RYF6 1773 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 A0A0D9SEW6 157 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 EDDM13A0A1B0GTR0 161 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 ATP9BO43861 1147 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 RAMP2O60895 175 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 ZNF217O75362 1048 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 NDUFA10O95299 355 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 IPO7O95373 1038 aaKnown RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 HLA-EP13747 358 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 NDUFV2P19404 249 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 IL1R2P27930 398 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 COPAP53621 1224 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SLC20A2Q08357 652 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 DPYSL2Q16555 572 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 CA9Q16790 459 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 OR2T3Q8NH03 318 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 ARHGEF2Q92974 986 aaKnown RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SPACA7Q96KW9 195 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 RPL10LQ96L21 214 aaKnown RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 KCTD15Q96SI1 283 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 ACE2Q9BYF1 805 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-206ENST00000439717 TPSD1Q9BZJ3 242 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 MAGEH1Q9H213 219 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 PRSS16Q9NQE7 514 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 GPATCH2LQ9NWQ4 482 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 SLCO3A1Q9UIG8 710 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 RAB23Q9ULC3 237 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
HSPG2-206ENST00000439717 DOCK4Q8N1I0 1966 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 H3BRJ5 948 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 DAPK3O43293 454 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 RARAP10276 462 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 TCF4P15884 667 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 P2RY2P41231 377 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 STK19P49842 368 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 CLCN6P51797 869 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 GEMIN4P57678 1058 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 GSDMDP57764 484 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 YBEYP58557 167 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 POLD3Q15054 466 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 PARP15Q460N3 678 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 DAB2IPQ5VWQ8 1189 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 RETSATQ6NUM9 610 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 CEP68Q76N32 757 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 TMPRSS6Q8IU80 811 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 SUMF1Q8NBK3 374 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 ZC3H10Q96K80 434 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 CALR3Q96L12 384 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 ZWILCHQ9H900 591 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 VPS51Q9UID3 782 aa12.1□□□□□ -0.47
HSPG2-206ENST00000439717 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
HSPG2-206ENST00000439717 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SNAP91O60641 907 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SIN3BO75182 1162 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 ZMPSTE24O75844 475 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 KRT7P08729 469 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SRCP12931 536 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 GOT1P17174 413 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 ARL4AP40617 200 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SLC1A1P43005 524 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SSR1P43307 286 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 NDST2P52849 883 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms