RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TOR4AQ9NXH8 423 aa11.82□□□□□ -0.52
IRF1-204ENST00000439555 FBXL12Q9NXK8 326 aa11.82□□□□□ -0.52
IRF1-204ENST00000439555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.82□□□□□ -0.52
IRF1-204ENST00000439555 SLCO3A1Q9UIG8 710 aa11.82□□□□□ -0.52
IRF1-204ENST00000439555 STAP1Q9ULZ2 295 aa11.82□□□□□ -0.52
IRF1-204ENST00000439555 TBC1D30Q9Y2I9 924 aa11.82□□□□□ -0.52
IRF1-204ENST00000439555 TENM4Q6N022 2769 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 TTC34A8MYJ7 566 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 M0QYT0 321 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 CLDN11O75508 207 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 GRAP2O75791 330 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 C1QL1O75973 258 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 C5AR1P21730 350 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 GRIA4P48058 902 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 CXCR3P49682 368 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 NME3Q13232 169 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 ZNF177Q13360 481 aaPredicted RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 ELAVL3Q14576 367 aaKnown RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 KIAA0895LQ68EN5 471 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 ZNF677Q86XU0 584 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 CACUL1Q86Y37 369 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 PTPRN2Q92932 1015 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 RPRD1AQ96P16 312 aaPredicted RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 FAM129BQ96TA1 746 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 FEM1AQ9BSK4 669 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 WDCPQ9H6R7 721 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 ARHGEF38Q9NXL2 777 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
IRF1-204ENST00000439555 TP53BP1Q12888 1972 aaPredicted RBP11.81□□□□□ -0.52
IRF1-204ENST00000439555 MAST4O15021 2626 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 MUC22E2RYF6 1773 aaPredicted RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 LRRC72A6NJI9 287 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 F8VZ95 297 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 FLRT2O43155 660 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 ATP9BO43861 1147 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 DFNA5O60443 496 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 PAGE1O75459 146 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 ADH1BP00325 375 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 PDGFRAP16234 1089 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 GOT1P17174 413 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 SLC8A1P32418 973 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 ABCG1P45844 678 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 CCR5P51681 352 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 GALCP54803 685 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 CDH4P55283 916 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 RACK1P63244 317 aaKnown RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 BNC1Q01954 994 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 SMAD1Q15797 465 aaKnown RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 HLA-BQ31612 363 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
IRF1-204ENST00000439555 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 ERICH1Q86X53 443 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 MMAAQ8IVH4 418 aaKnown RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 DHX40Q8IX18 779 aaKnown RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 OR2T34Q8NGX1 318 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 SETD7Q8WTS6 366 aaKnown RBP11.8□□□□□ -0.52
IRF1-204ENST00000439555 FRS2Q8WU20 508 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 IGSF8Q969P0 613 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 FAM131CQ96AQ9 280 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 SPAG5Q96R06 1193 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 NEUROG2Q9H2A3 272 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 KDM4CQ9H3R0 1056 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 MTG2Q9H4K7 406 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 PRORYQ9H606 182 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 GAREM1Q9H706 876 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 TM9SF3Q9HD45 589 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 OR51B4Q9Y5P0 310 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
IRF1-204ENST00000439555 COL5A1P20908 1838 aaPredicted RBP11.79□□□□□ -0.52
IRF1-204ENST00000439555 NAV2Q8IVL1 2488 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 SYNJ2BP-COX16A0A087WUM0 186 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 A0A1W2PPC4 97 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 DRGXA6NNA5 263 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 PES1O00541 588 aaKnown RBP11.79□□□□□ -0.52
IRF1-204ENST00000439555 VILLO15195 856 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 ALOX15BO15296 676 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 MID1O15344 667 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 SLC7A4O43246 635 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 FSBPO95073 299 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 IGHV4-34P06331 123 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 TPM2P07951 284 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 CSNK1EP49674 416 aaKnown RBP11.79□□□□□ -0.52
IRF1-204ENST00000439555 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
IRF1-204ENST00000439555 HSP90AA4PQ58FG1 418 aa11.79□□□□□ -0.52
IRF1-204ENST00000439555 OTUD1Q5VV17 481 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms