RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZNF132P52740 706 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 CCNA1P78396 465 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 HPCAP84074 193 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 MPP3Q13368 585 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 TCEAL1Q15170 157 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 UNC5AQ6ZN44 842 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 OFCC1Q8IZS5 231 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 NAT8LQ8N9F0 302 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 PIWIL2Q8TC59 973 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZFAND2BQ8WV99 257 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATP2A3Q93084 1043 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 IFT43Q96FT9 208 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 TBCBQ99426 244 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ADARB2Q9NS39 739 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 PAK5Q9P286 719 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 A8MU76 341 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 PIGRP01833 764 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC4A1P02730 911 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 IGFBP6P24592 240 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 MPSTP25325 297 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 STIP1P31948 543 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC5A3P53794 718 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 YWHAZP63104 245 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 CLDN10P78369 228 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 CDKL1Q00532 357 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 LAMC2Q13753 1193 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAPK11Q15759 364 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAP7D1Q3KQU3 841 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 FBXO48Q5FWF7 155 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 PERM1Q5SV97 790 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 C6orf183Q5T699 404 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 LRRC38Q5VT99 294 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 LRRC8EQ6NSJ5 796 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 LPPQ93052 612 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 NR1H4Q96RI1 486 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 USP29Q9HBJ7 922 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMEM216Q9P0N5 145 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ADAMTS5Q9UNA0 930 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 SETSIPP0DME0 302 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 ITKQ08881 620 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC12A1Q13621 1099 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF460Q14592 562 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 BOLA3Q53S33 107 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 RYBPQ8N488 228 aaPredicted RBP10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 PAF1Q8N7H5 531 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 APPL2Q8NEU8 664 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC44A1Q8WWI5 657 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 ANKRD27Q96NW4 1050 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 KCNK4Q9NYG8 393 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 SFMBT1Q9UHJ3 866 aa10.15□□□□□ -0.79
CDC42SE1-202ENST00000439374 NRXN2Q9P2S2 1712 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 CASTOR2A6NHX0 329 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 C2CD4BA6NLJ0 364 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 PDLIM1O00151 329 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 TSPAN1O60635 241 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 RALBP11234 206 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ITGAXP20702 1163 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARPP19P56211 112 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 IRF9Q00978 393 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC6A3Q01959 620 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 SOWAHAQ2M3V2 549 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 PKP2Q99959 881 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 FERMT1Q9BQL6 677 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 Q9H521 79 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC39A10Q9ULF5 831 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARHGEF37A1IGU5 675 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZBTB14O43829 449 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 TCEA3O75764 348 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 NCAM1P13591 858 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 PHEXP78562 749 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 CD300CQ08708 224 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 KLHL35Q6PF15 583 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 PQLC1Q8N2U9 271 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 TFB1MQ8WVM0 346 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF669Q96BR6 464 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 ALKBH8Q96BT7 664 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 DGCR14Q96DF8 476 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 VPS33BQ9H267 617 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 NRDE2Q9H7Z3 1164 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 COG4Q9H9E3 785 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 CCDC167Q9P0B6 97 aa10.14□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRAFD1O14545 582 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 CASQ2O14958 399 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 HNRNPCL1O60812 293 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRMUO75648 421 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 MCF2P10911 925 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 COX4I1P13073 169 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PSMB4P28070 264 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 CA8P35219 290 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 RPL5P46777 297 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SNAPC2Q13487 334 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 DCTN2Q13561 401 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SEPT6Q14141 434 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms