RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 HAPLN2Q9GZV7 340 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SLC38A7Q9NVC3 462 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 APOL1O14791 398 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 NRBF2Q96F24 287 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 APOPT1Q96IL0 206 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 CDRT15Q96T59 188 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 SLC39A3Q9BRY0 314 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 FRMD8Q9BZ67 464 aaPredicted RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 CLK4Q9HAZ1 481 aaKnown RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 WNK3Q9BYP7 1800 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 ZSCAN5BA6NJL1 495 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 DAB1O75553 588 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 GPD1P21695 349 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 CSE1LP55060 971 aaKnown RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 RPL26P61254 145 aaKnown RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 EFHC2Q5JST6 749 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 FBXW8Q8N3Y1 598 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 GNPTGQ9UJJ9 305 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 ERVK-11Q9UQG0 969 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 TBC1D30Q9Y2I9 924 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 TTLL3Q9Y4R7 772 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 CLUHO75153 1309 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 CCRL2O00421 344 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 AQP9O43315 295 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 RGS20O76081 388 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 APOC2P02655 101 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 ETFBP38117 255 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 SLC18A1P54219 525 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 TTC39BQ5VTQ0 682 aaPredicted RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 RSBN1Q5VWQ0 802 aaPredicted RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 C15orf39Q6ZRI6 1047 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 SLC26A11Q86WA9 606 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 ADCY4Q8NFM4 1077 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 OR6B3Q8NGW1 331 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 TMA16Q96EY4 203 aaKnown RBP16.11■□□□□ 0.17
DHFR-201ENST00000439211 HGH1Q9BTY7 390 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 EFHD1Q9BUP0 239 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 ST14Q9Y5Y6 855 aa16.11■□□□□ 0.17
DHFR-201ENST00000439211 A0A1B0GTW7 788 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 FYNP06241 537 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 PGK2P07205 417 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 RBL1P28749 1068 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 FSTL1Q12841 308 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 BFSP2Q13515 415 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 MXD4Q14582 209 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 IER5Q5VY09 327 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.1■□□□□ 0.171e-9■■■□□ 17
DHFR-201ENST00000439211 BHLHE22Q8NFJ8 381 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 CYGBQ8WWM9 190 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 ZNF512Q96ME7 567 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 BEGAINQ9BUH8 593 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 PAK5Q9P286 719 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 ASNA1O43681 348 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 DEAF1O75398 565 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 PRKD1Q15139 912 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 SH3PXD2AQ5TCZ1 1133 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 EFCAB12Q6NXP0 572 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 BORAQ6PGQ7 559 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 TDRPQ86YL5 185 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 OLFM1Q99784 485 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 MTG1Q9BT17 334 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 C1orf50Q9BV19 199 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 PNPLA3Q9NST1 481 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 TBC1D14Q9P2M4 693 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 FBXO21O94952 628 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 SERPINB5P36952 375 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 ZNF252P-AS1Q0IIN9 211 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 EEF1DP3Q658K8 133 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 PDPK2PQ6A1A2 396 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 Q8N9G6 341 aaPredicted RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 ACTRT2Q8TDY3 377 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 CDKL2Q92772 493 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 RBM38Q9H0Z9 239 aaKnown RBP16.1■□□□□ 0.17
DHFR-201ENST00000439211 KCNK13Q9HB14 408 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 SNCAIPQ9Y6H5 919 aa16.1■□□□□ 0.17
DHFR-201ENST00000439211 GUCY1B2O75343 617 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SPAG6O75602 509 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 PTPRAP18433 802 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 PFKPQ01813 784 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 ZBTB49Q6ZSB9 765 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 TMEM130Q8N3G9 435 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SLC35B2Q8TB61 432 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 TRPC4APQ8TEL6 797 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 HPDLQ96IR7 371 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 C2orf40Q9H1Z8 148 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 RNF19AQ9NV58 838 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SNX9Q9Y5X1 595 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 PCP4L1A6NKN8 68 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SYCE1LA8MT33 242 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 CYB561D2O14569 222 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 MICAL2O94851 1124 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 PHKG1Q16816 387 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms