RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 VWA3AA6NCI4 1184 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 NPIPB15A6NHN6 443 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 HNRNPCL2B2RXH8 293 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RNF113AO15541 343 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 HNRNPCL1O60812 293 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TPM3P06753 285 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 INHBAP08476 426 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 XRCC6P12956 609 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TYRP14679 529 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 IL1R1P14778 569 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PDGFRAP16234 1089 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PTAFRP25105 342 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 APEX1P27695 318 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RFC4P35249 363 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PSMC2P35998 433 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ARCN1P48444 511 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 FLT3LGP49771 235 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 DIO1P49895 249 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF81P51508 661 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 LGALS4P56470 323 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RPP30P78346 268 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CETN1Q12798 172 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RALGDSQ12967 914 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRIM25Q14258 630 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 HABP2Q14520 560 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 EPHA7Q15375 998 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SYCP1Q15431 976 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADRM1Q16186 407 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PREPLQ4J6C6 727 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZRANB3Q5FWF4 1079 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 EPHA10Q5JZY3 1008 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 STXBP5Q5T5C0 1151 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 UTP14CQ5TAP6 766 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 HECTD2Q5U5R9 776 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CES4AQ5XG92 561 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 KRT40Q6A162 431 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM83HQ6ZRV2 1179 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 UNC13DQ70J99 1090 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RNF44Q7L0R7 432 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 UBE3BQ7Z3V4 1068 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CNTN4Q8IWV2 1026 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 FBXW8Q8N3Y1 598 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SH2D3CQ8N5H7 860 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 VGLL2Q8N8G2 317 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RTL3Q8N8U3 475 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 POMGNT2Q8NAT1 580 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 POGLUT1Q8NBL1 392 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 OR52K1Q8NGK4 314 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 OR2I1PQ8NGU4 316 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CALML6Q8TD86 181 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 DLG3Q92796 817 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC22A18Q96BI1 424 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC7A6OSQ96CW6 309 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PERPQ96FX8 193 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 NLRP4Q96MN2 994 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRAPPC9Q96Q05 1148 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 RAB3IPQ96QF0 476 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 MNTQ99583 582 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 NOL10Q9BSC4 688 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TEX12Q9BXU0 123 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 GCOM2Q9BZD3 368 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 OSBPL6Q9BZF3 934 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 NACAP1Q9BZK3 213 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRIM7Q9C029 511 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 B3GNT4Q9C0J1 378 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC6A15Q9H2J7 730 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CLSTN2Q9H4D0 955 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 EHD1Q9H4M9 534 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 CHODLQ9H9P2 273 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 IL21RQ9HBE5 538 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 NOD2Q9HC29 1040 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 G6PC2Q9NQR9 355 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC35D1Q9NTN3 355 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PNPOQ9NVS9 261 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 DDX43Q9NXZ2 648 aaKnown RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 TAS2R10Q9NYW0 307 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 MARCH4Q9P2E8 410 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 APPL1Q9UKG1 709 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 MTUS1Q9ULD2 1270 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHA6Q9UN73 950 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ASB3Q9Y575 518 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHA3Q9Y5H8 950 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 B3GALT1Q9Y5Z6 326 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 AKNAQ7Z591 1439 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 WDR19Q8NEZ3 1342 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 KDM3AQ9Y4C1 1321 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRAV34A0A0B4J273 112 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LRRD1A4D1F6 860 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 L7N2F9 121 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF263O14978 683 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TGFB1I1O43294 461 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 VEGFDO43915 354 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MFAP3LO75121 409 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 PSMD10O75832 226 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 KRT38O76015 456 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 FGFR1OPO95684 399 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms