RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CPB1P15086 417 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 NPR3P17342 541 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ASPAP45381 313 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 NUP107P57740 925 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ACTR3P61158 418 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MSLNQ13421 630 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 NRF1Q16656 503 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PCID2Q5JVF3 399 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 LIPMQ5VYY2 423 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 METTL21CQ5VZV1 264 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 NEPROQ6NW34 567 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PMF1Q6P1K2 205 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PIWIL4Q7Z3Z4 852 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 LRRC52Q8N7C0 313 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 EFHBQ8N7U6 833 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 UCMAQ8WVF2 138 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MARK4Q96L34 752 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 BEGAINQ9BUH8 593 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ATXN3LQ9H3M9 355 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 POMKQ9H5K3 350 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 VTA1Q9NP79 307 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 GPRC5DQ9NZD1 345 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SLC7A8Q9UHI5 535 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CDH22Q9UJ99 828 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CACNA1SQ13698 1873 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MYO5AQ9Y4I1 1855 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 UBR2Q8IWV8 1755 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SLC15A5A6NIM6 579 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PAPSS1O43252 624 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 BNIP3LO60238 219 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MSCO60682 206 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 FCGR1AP12314 374 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 VCLP18206 1134 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ATP5F1P24539 256 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PSME3P61289 254 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 FUT11Q495W5 492 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PPM1JQ5JR12 505 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CWF19L1Q69YN2 538 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 FAM228AQ86W67 206 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 LZTR1Q8N653 840 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MTMR14Q8NCE2 650 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 TNIP2Q8NFZ5 429 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 RDH11Q8TC12 318 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 KCTD4Q8WVF5 259 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 QKIQ96PU8 341 aaKnown RBP eCLIP6.8□□□□□ -1.322e-14■■■□□ 16.7
CSDE1-205ENST00000438362 GPR20Q99678 358 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 TBL1YQ9BQ87 522 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 MRPL45Q9BRJ2 306 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 TKTL2Q9H0I9 626 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SEMA6AQ9H2E6 1030 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 WDR55Q9H6Y2 383 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 NT5MQ9NPB1 228 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 OR12D3Q9UGF7 316 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF214Q9UL59 606 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 AP4B1Q9Y6B7 739 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ADAMTS7Q9UKP4 1686 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 C15orf38-AP3S2A0A0A6YYH1 394 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CAPN8A6NHC0 703 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 KLF11O14901 512 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 HOXC6P09630 235 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PTPN1P18031 435 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 GRM5P41594 1212 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 GPD2P43304 727 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 HK2P52789 917 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 POU4F1Q01851 419 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SLC18A2Q05940 514 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 VGLL4Q14135 290 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SH3PXD2AQ5TCZ1 1133 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ARPINQ7Z6K5 226 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 DENND1AQ8TEH3 1009 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 FAM136AQ96C01 138 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 FAXDC2Q96IV6 333 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CAB39LQ9H9S4 337 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ENTPD7Q9NQZ7 604 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 DNAJC28Q9NX36 388 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 PAIP2BQ9ULR5 123 aaKnown RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 RNF112Q9ULX5 631 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 TEX264Q9Y6I9 313 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 SLC30A1Q9Y6M5 507 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 KAT6AQ92794 2004 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 CCL15-CCL14A0A0B4J2E2 113 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TRIM38O00635 465 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 UGT1A9O60656 530 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FESP07332 822 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 USP17L7P0C7H9 530 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CHRM3P20309 590 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 AXLP30530 894 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CCR1P32246 355 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PTPN9P43378 593 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SERPINB10P48595 397 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 NR1H2P55055 460 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC25A11Q02978 314 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FRG1Q14331 258 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CCL15Q16663 113 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC25A52Q3SY17 297 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PAN2Q504Q3 1202 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 VWA5B1Q5TIE3 1220 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms