RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 KCNT2Q6UVM3 1135 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 PHF21BQ96EK2 531 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 GAD1Q99259 594 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ACO2Q99798 780 aaKnown RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ZYG11BQ9C0D3 744 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ADH1AP07327 375 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ITGB6P18564 788 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 RANBP1P43487 201 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ZNF143P52747 638 aaPredicted RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 PLIN5Q00G26 463 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 MTDHQ86UE4 582 aaKnown RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ATG16L2Q8NAA4 619 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 FBXO25Q8TCJ0 367 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ADPRHL2Q9NX46 363 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 GIT1Q9Y2X7 761 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 PIK3C2AO00443 1686 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 C1QTNF3-AMACRE9PGA6 284 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 OPLAHO14841 1288 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 SEC24CP53992 1094 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 GTF2BQ00403 316 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 TSNQ15631 228 aaKnown RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 NAALADL1Q9UQQ1 740 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ASGR1P07306 291 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 CTSEP14091 401 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 VAC14Q08AM6 782 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 FASTKQ14296 549 aaKnown RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ADAM32Q8TC27 787 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 SMPD4Q9NXE4 827 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ZSCAN5CA6NGD5 496 aaPredicted RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 KDELR1P24390 212 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 TTPAP49638 278 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ANKRD27Q96NW4 1050 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 PCDHGC5Q9Y5F6 944 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 C15orf38-AP3S2A0A0A6YYH1 394 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 CD3EAPO15446 510 aaKnown RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ARPINQ7Z6K5 226 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 PSTKQ8IV42 348 aaKnown RBP16.12■□□□□ 0.17
PTPN13-204ENST00000436978 OR12D3Q9UGF7 316 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 BTN3A1O00481 513 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 SEC22BO75396 215 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 CSH1P0DML2 217 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 CSH2P0DML3 217 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 FASP25445 335 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 SCTRP47872 440 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 CNGA2Q16280 664 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ALFQ53S48 1182 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 HSFY1Q96LI6 401 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 NOD2Q9HC29 1040 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 GTF2A1LQ9UNN4 478 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 PTPN4P29074 926 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 WDR18Q9BV38 432 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 ANGPT1Q15389 498 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 GLMNQ92990 594 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 APOL4Q9BPW4 351 aa16.12■□□□□ 0.17
PTPN13-204ENST00000436978 A0A0A0MRY4 1105 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 TBC1D3BA6NDS4 549 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 KPNA3O00505 521 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 HJURPQ8NCD3 748 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 SPATA13Q96N96 652 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 ABCB1P08183 1280 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 TAL1P17542 331 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 TALDO1P37837 337 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 AFTPHQ6ULP2 937 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 C16orf59Q7L2K0 433 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 EIF4E1BA6NMX2 242 aaKnown RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 EML1O00423 815 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 ATP6V1C1P21283 382 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 AIF1P55008 147 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 CDH8P55286 799 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 PWP1Q13610 501 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 FRG1Q14331 258 aaKnown RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 PCID2Q5JVF3 399 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 ATXN2LQ8WWM7 1075 aaKnown RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 POMKQ9H5K3 350 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 SNX6Q9UNH7 406 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 CTNNB1P35222 781 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 RPL3P39023 403 aaKnown RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 HGH1Q9BTY7 390 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 TRIM13O60858 407 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 EPN2O95208 641 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 UBTFL6P0CB48 400 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-204ENST00000436978 NTSP30990 170 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 HK2P52789 917 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 NOGQ13253 232 aa16.11■□□□□ 0.17
PTPN13-204ENST00000436978 CRY1Q16526 586 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms