RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZCWPW2A0A1B0GU75 182 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 ITM2AO43736 263 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 FKBP6O75344 327 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 LYPLA1O75608 230 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 ANXA9O76027 345 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 CYP11A1P05108 521 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 C6orf222P0C671 652 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 AKR1A1P14550 325 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 NFKB1P19838 968 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 CCNCP24863 283 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 CLCNKBP51801 687 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 KDSRQ06136 332 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 MPP3Q13368 585 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 TUBB3Q13509 450 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 UGP2Q16851 508 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 BRMS1LQ5PSV4 323 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 RABGAP1LQ5R372 815 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 GPRIN1Q7Z2K8 1008 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 KCNMB4Q86W47 210 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 LZTR1Q8N653 840 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 OR6Y1Q8NGX8 325 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 ADAM32Q8TC27 787 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 RNF34Q969K3 372 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 LENG1Q96BZ8 264 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 MIEF2Q96C03 454 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 ZNF333Q96JL9 665 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 AGAP3Q96P47 875 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 GAD1Q99259 594 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 GORASP1Q9BQQ3 440 aa10.64□□□□□ -0.71
CD44-210ENST00000434472 MLPHQ9BV36 600 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 C20orf96Q9NUD7 363 aaPredicted RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 PIH1D1Q9NWS0 290 aaKnown RBP10.64□□□□□ -0.71
CD44-210ENST00000434472 A0A096LPK6 155 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ARL5CA6NH57 179 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 PRR5-ARHGAP8B1AHC4 643 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 FGF10O15520 208 aaPredicted RBP10.63□□□□□ -0.71
CD44-210ENST00000434472 KIF1CO43896 1103 aaKnown RBP10.63□□□□□ -0.71
CD44-210ENST00000434472 CACNG3O60359 315 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
CD44-210ENST00000434472 KRT36O76013 467 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 HSPA4LO95757 839 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 PRKCGP05129 697 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 COL6A2P12110 1019 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 SKIP12755 728 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 CD68P34810 354 aaPredicted RBP10.63□□□□□ -0.71
CD44-210ENST00000434472 CPA2P48052 419 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 IDH3AP50213 366 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ARHGAP8P85298 464 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ASPHQ12797 758 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ANO4Q32M45 955 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 PPM1JQ5JR12 505 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 CFAP157Q5JU67 520 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 SNX30Q5VWJ9 437 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 METTL21CQ5VZV1 264 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 FSTL4Q6MZW2 842 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 FAM171BQ6P995 826 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 AAGABQ6PD74 315 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 CES3Q6UWW8 571 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 LRRC74BQ6ZQY2 392 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 BHLHA9Q7RTU4 235 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 CLEC14AQ86T13 490 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ULK2Q8IYT8 1036 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 THEM5Q8N1Q8 247 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 NETO2Q8NC67 525 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 GSTCDQ8NEC7 633 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 URGCPQ8TCY9 931 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 STON2Q8WXE9 905 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 MYLPFQ96A32 169 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 CMTM5Q96DZ9 223 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 ZNF778Q96MU6 729 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 UROC1Q96N76 676 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 SORT1Q99523 831 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 EBF4Q9BQW3 602 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 KIFC1Q9BW19 673 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
CD44-210ENST00000434472 TLK1Q9UKI8 766 aa10.63□□□□□ -0.71
CD44-210ENST00000434472 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 MANSC4A6NHS7 340 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 MAP3K7O43318 606 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ATP9BO43861 1147 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TRIM13O60858 407 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ZNF623O75123 536 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 LRIG2O94898 1065 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CELF2O95319 508 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 TOP3BO95985 862 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 JCHAINP01591 159 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 SCNN1GP51170 649 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 COPAP53621 1224 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 GEMP55040 296 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 AP2B1P63010 937 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 MRPS35P82673 323 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 ZBTB17Q13105 803 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 UBAP2LQ14157 1087 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 TAF1CQ15572 869 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 CCL14Q16627 93 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 UPP1Q16831 310 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms