RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 MYO1FO00160 1098 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 PRPSAP2O60256 369 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 SYNCRIPO60506 623 aaKnown RBP18.85■□□□□ 0.61
HLA-F-220ENST00000434407 COPAP53621 1224 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 HNRNPA1L2Q32P51 320 aaKnown RBP18.85■□□□□ 0.61
HLA-F-220ENST00000434407 METTL3Q86U44 580 aaKnown RBP18.85■□□□□ 0.61
HLA-F-220ENST00000434407 BTBD6Q96KE9 485 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 EPAS1Q99814 870 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 SNRNP25Q9BV90 132 aaKnown RBP18.85■□□□□ 0.61
HLA-F-220ENST00000434407 TPSD1Q9BZJ3 242 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 MKRN2Q9H000 416 aaKnown RBP18.85■□□□□ 0.61
HLA-F-220ENST00000434407 FBRSQ9HAH7 460 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 NDFIP2Q9NV92 336 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 PCSK1NQ9UHG2 260 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 SLCO3A1Q9UIG8 710 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 VPS28Q9UK41 221 aa18.85■□□□□ 0.61
HLA-F-220ENST00000434407 A0A0D9SEW6 157 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 RPP40O75818 363 aaKnown RBP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 IL1R2P27930 398 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 P2RY2P41231 377 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 ST8SIA6P61647 398 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 TCEAL1Q15170 157 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 CA9Q16790 459 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 MAP7D1Q3KQU3 841 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 USP39Q53GS9 565 aaKnown RBP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 DAB2IPQ5VWQ8 1189 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 RWDD4Q6NW29 188 aaKnown RBP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 ASCL5Q7RTU5 278 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 DCAF4L2Q8NA75 395 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 OR2T3Q8NH03 318 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 ZC3H10Q96K80 434 aaKnown RBP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 RPL10LQ96L21 214 aaKnown RBP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 MUC3BQ9H195 1237 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 PRSS16Q9NQE7 514 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 GPATCH2LQ9NWQ4 482 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 BCCIPQ9P287 314 aaKnown RBP eCLIP18.84■□□□□ 0.61
HLA-F-220ENST00000434407 CTTNBP2NLQ9P2B4 639 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 IMPACTQ9P2X3 320 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 LCMT1Q9UIC8 334 aa18.84■□□□□ 0.61
HLA-F-220ENST00000434407 PI4KAP42356 2102 aa18.83■□□□□ 0.61
HLA-F-220ENST00000434407 CXorf51AA0A1B0GTR3 108 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ATP9BO43861 1147 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ZMPSTE24O75844 475 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 MTA2O94776 668 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 TCF4P15884 667 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 EPHB2P29323 1055 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 STK19P49842 368 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ZNF135P52742 658 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 SLC25A11Q02978 314 aaKnown RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 GNA12Q03113 381 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 SIM2Q14190 667 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 BOLA3Q53S33 107 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ZNF366Q8N895 744 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 RTL3Q8N8U3 475 aaKnown RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 OR7D4Q8NG98 312 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 FRS2Q8WU20 508 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 KCTD15Q96SI1 283 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 C2orf49Q9BVC5 232 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 ACE2Q9BYF1 805 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 VPS51Q9UID3 782 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.6
HLA-F-220ENST00000434407 HS3ST2Q9Y278 367 aa18.83■□□□□ 0.6
HLA-F-220ENST00000434407 TARSL2A2RTX5 802 aaKnown RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 TTC34A8MYJ7 566 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 FGF10O15520 208 aaPredicted RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 ZBTB24O43167 697 aaPredicted RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 CREB3O43889 395 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 SNAP91O60641 907 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 PROSCO94903 275 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 HCAR3P49019 387 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 MRE11P49959 708 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 KRT83P78385 493 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 BYSLQ13895 437 aaKnown RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 DPYSL2Q16555 572 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 C9orf64Q5T6V5 341 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 C11orf74Q86VG3 221 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 TMPRSS6Q8IU80 811 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 TMTC1Q8IUR5 882 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 SH2D3CQ8N5H7 860 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 SLC35G2Q8TBE7 412 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 TEKT4Q8WW24 435 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 PTPRN2Q92932 1015 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 ERLEC1Q96DZ1 483 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 SLC6A17Q9H1V8 727 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 MAGEH1Q9H213 219 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 DHX35Q9H5Z1 703 aaKnown RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 NOL6Q9H6R4 1146 aaKnown RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 CATSPERBQ9H7T0 1116 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 PRDM16Q9HAZ2 1276 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 OSGEPQ9NPF4 335 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 USP36Q9P275 1121 aaKnown RBP18.82■□□□□ 0.6
HLA-F-220ENST00000434407 CFAP54Q96N23 3096 aa18.82■□□□□ 0.6
HLA-F-220ENST00000434407 EDDM13A0A1B0GTR0 161 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 DCLK1O15075 740 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 ZNF217O75362 1048 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 MAN1A1P33908 653 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 ETFBP38117 255 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 NNMTP40261 264 aa18.81■□□□□ 0.6
HLA-F-220ENST00000434407 NUMBP49757 651 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms