RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HDAC3O15379 428 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 MICAL2O94851 1124 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 PSAPP07602 524 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF24P17028 368 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 CDH3P22223 829 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF143P52747 638 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 PITRM1Q5JRX3 1037 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC15A3Q8IY34 581 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC4A11Q8NBS3 891 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 MCUQ8NE86 351 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 CYGBQ8WWM9 190 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 TWNKQ96RR1 684 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 A0A087WXM4 84 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF839A8K0R7 811 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM233B4DJY2 109 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 E7ENX8 843 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 ACOT8O14734 319 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 SPTLC1O15269 473 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 GRIA4P48058 902 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 RPL14P50914 215 aaKnown RBP11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 PSME3P61289 254 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 NR1D2Q14995 579 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 GLRA4Q5JXX5 417 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 TRNP1Q6NT89 227 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 CARM1Q86X55 608 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM126BQ8IUX1 230 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF597Q96LX8 424 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 AGAP2Q99490 1192 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 NMRAL1Q9HBL8 299 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 SYBUQ9NX95 663 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 ZDHHC2Q9UIJ5 367 aa11.77□□□□□ -0.52
HMGCS1-202ENST00000433297 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 TK2O00142 265 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 TRIM38O00635 465 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 NRP1O14786 923 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ARSAP15289 507 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CYP2F1P24903 491 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 AVPR1AP37288 418 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF829Q3KNS6 432 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC153Q494R4 210 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 OLFML1Q6UWY5 402 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CDKL3Q8IVW4 592 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 COLGALT1Q8NBJ5 622 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 FAM110BQ8TC76 370 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC7A3Q8WY07 619 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 LGMNQ99538 433 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 HEPHQ9BQS7 1158 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 MAF1Q9H063 256 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 POLR1BQ9H9Y6 1135 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC167Q9P0B6 97 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 SOCS2O14508 198 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 MT-CO1P00395 513 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CDH5P33151 784 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ASPAP45381 313 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 YAP1P46937 504 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ATXN1P54253 815 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 CYP2A13Q16696 494 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 AARS2Q5JTZ9 985 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 SPATA6LQ8N4H0 392 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 SNRNP25Q9BV90 132 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 BRD8Q9H0E9 1235 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 VPS45Q9NRW7 570 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 MFHAS1Q9Y4C4 1052 aa11.77□□□□□ -0.53
HMGCS1-202ENST00000433297 GSTT2P0CG29 244 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 MAP4P27816 1152 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 GP5P40197 560 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 IGBP1P78318 339 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 PMS2P3Q13401 168 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 TRIM25Q14258 630 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 Q3C1V9 767 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SGF29Q96ES7 293 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 PXMP2Q9NR77 195 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNHIT2Q9UHR6 403 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC39A10Q9ULF5 831 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 G3V2L1 256 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 NOL3O60936 208 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 ATG7O95352 703 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 TGM2P21980 687 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms