RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 LRRN4Q8WUT4 740 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 RSAD2Q8WXG1 361 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 HMCESQ96FZ2 354 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 NEDD8-MDP1E9PL57 170 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 SGK1O00141 431 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 NFATC1O95644 943 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 RBL1P28749 1068 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 MRPS25P82663 173 aaKnown RBP27.1■■□□□ 1.93
TMEM248-205ENST00000433271 SYDE1Q6ZW31 735 aaPredicted RBP27.1■■□□□ 1.93
TMEM248-205ENST00000433271 YAF2Q8IY57 180 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 FAM71DQ8N9W8 422 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 FIBINQ8TAL6 211 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 ZFYVE19Q96K21 471 aa27.1■■□□□ 1.93
TMEM248-205ENST00000433271 A0A0D9SEW6 157 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 FAM187AA6NFU0 413 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 ADH1CP00326 375 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 CYP17A1P05093 508 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 TYRP14679 529 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 SP100P23497 879 aaPredicted RBP27.09■■□□□ 1.93
TMEM248-205ENST00000433271 CCNCP24863 283 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 ETFBP38117 255 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 OXCT1P55809 520 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 HTR4Q13639 388 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 FSCBQ5H9T9 825 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 HEATR6Q6AI08 1181 aaKnown RBP27.09■■□□□ 1.93
TMEM248-205ENST00000433271 JAMLQ86YT9 394 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 MYRIPQ8NFW9 859 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 HTR3CQ8WXA8 447 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 ARHGEF2Q92974 986 aaKnown RBP27.09■■□□□ 1.93
TMEM248-205ENST00000433271 FERMT1Q9BQL6 677 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 PHF7Q9BWX1 381 aaPredicted RBP27.09■■□□□ 1.93
TMEM248-205ENST00000433271 EBF3Q9H4W6 596 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 NEU2Q9Y3R4 380 aa27.09■■□□□ 1.93
TMEM248-205ENST00000433271 KCNN4O15554 427 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 MAFKO60675 156 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 ARSAP15289 507 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 ACVRL1P37023 503 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 SERINC3Q13530 473 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 SMAD2Q15796 467 aaKnown RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 ZNF557Q8N988 423 aaPredicted RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 RPP25Q9BUL9 199 aaKnown RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 IPO11Q9UI26 975 aaKnown RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 CLEC4EQ9ULY5 219 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 NUMBLQ9Y6R0 609 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 HOXC11O43248 304 aaPredicted RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 MTSS1O43312 755 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 VAV1P15498 845 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 GDF10P55107 478 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 PPP1R7Q15435 360 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 RNF219Q5W0B1 726 aaPredicted RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 ARHGAP36Q6ZRI8 547 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 CCDC13Q8IYE1 715 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 WFDC5Q8TCV5 224 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 RTP4Q96DX8 246 aa27.08■■□□□ 1.93
TMEM248-205ENST00000433271 KIAA1522Q9P206 1035 aaPredicted RBP27.08■■□□□ 1.93
TMEM248-205ENST00000433271 KIF26AQ9ULI4 1882 aaPredicted RBP27.07■■□□□ 1.92
TMEM248-205ENST00000433271 MYOFQ9NZM1 2061 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 C2CD4DB7Z1M9 353 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 CHADO15335 359 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 RHOXF2BP0C7M4 288 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 ADH5P11766 374 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 GAD2Q05329 585 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 GRM2Q14416 872 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 TIGD7Q6NT04 549 aaPredicted RBP27.07■■□□□ 1.92
TMEM248-205ENST00000433271 PLCD3Q8N3E9 789 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 CCDC89Q8N998 374 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 OR7D4Q8NG98 312 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 RHOXF2Q9BQY4 288 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 FEM1AQ9BSK4 669 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 TRMT61BQ9BVS5 477 aaKnown RBP27.07■■□□□ 1.92
TMEM248-205ENST00000433271 MUC3BQ9H195 1237 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 CHD5Q8TDI0 1954 aa27.07■■□□□ 1.92
TMEM248-205ENST00000433271 IFNB1P01574 187 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 SLC7A5Q01650 507 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 ERCC6LQ2NKX8 1250 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 IL31Q6EBC2 164 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 FATE1Q969F0 183 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 ACE2Q9BYF1 805 aaPredicted RBP27.06■■□□□ 1.92
TMEM248-205ENST00000433271 SLC2A11Q9BYW1 496 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 ECT2Q9H8V3 914 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 HPS4Q9NQG7 708 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.06■■□□□ 1.92
TMEM248-205ENST00000433271 OR51B4Q9Y5P0 310 aa27.06■■□□□ 1.92
TMEM248-205ENST00000433271 V9GYY5 206 aaPredicted RBP27.06■■□□□ 1.92
TMEM248-205ENST00000433271 PRUNE2Q8WUY3 3088 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 KRT14P02533 472 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 PTK6Q13882 451 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 PUS10Q3MIT2 529 aaKnown RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 ZNF354CQ86Y25 554 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 ALG14Q96F25 216 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 SPON2Q9BUD6 331 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 DMGDHQ9UI17 866 aaKnown RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 C5orf60A6NFR6 353 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 KCNK1O00180 336 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 MATN3O15232 486 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 CACNG3O60359 315 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 MZF1P28698 734 aaPredicted RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 GDI1P31150 447 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 CLCN6P51797 869 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 TNK2Q07912 1038 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms