RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KCTD8Q6ZWB6 473 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TFAP2DQ7Z6R9 452 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 NEK8Q86SG6 692 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 RIOX2Q8IUF8 465 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 GALNT12Q8IXK2 581 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ETNPPLQ8TBG4 499 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 PDCD6IPQ8WUM4 868 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TFB1MQ8WVM0 346 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 NYXQ9GZU5 481 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 C12orf65Q9H3J6 166 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 HOMER2Q9NSB8 354 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 C20orf96Q9NUD7 363 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 MRPL39Q9NYK5 338 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 DNMT3LQ9UJW3 386 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCDHA6Q9UN73 950 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 hCG_1642624A0A1W2PR95 340 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TYW5A2RUC4 315 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 DAB1O75553 588 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 RPS6KA4O75676 772 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 BCAS2O75934 225 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 NDST3O95803 873 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 BMP1P13497 986 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PTPN1P18031 435 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PRDX5P30044 214 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CENPAP49450 140 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 RPS8P62241 208 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 GPC5P78333 572 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 UBE2SQ16763 222 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 DALRD3Q5D0E6 543 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM47AQ5JRC9 791 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 MAMDC4Q6UXC1 1216 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 AADATQ8N5Z0 425 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 C7orf57Q8NEG2 295 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 NRBF2Q96F24 287 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 OPALINQ96PE5 141 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ASB2Q96Q27 587 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TWNKQ96RR1 684 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CDRT15Q96T59 188 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ACSS3Q9H6R3 686 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 RPRD1BQ9NQG5 326 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 XPNPEP1Q9NQW7 623 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 SH3GLB2Q9NR46 395 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CHST12Q9NRB3 414 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 BLOC1S4Q9NUP1 217 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 DUS2Q9NX74 493 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 HCN4Q9Y3Q4 1203 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CNTNAP5Q8WYK1 1306 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 USP17L21D6R901 530 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 F5H6K3 240 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PLK4O00444 970 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PLOD2O00469 737 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 KPNA6O60684 536 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 RNGTTO60942 597 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 FGF18O76093 207 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR7A10O76100 309 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PTTG1O95997 202 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCNAP12004 261 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 MATN1P21941 496 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 DNAJB2P25686 324 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 KLRC2P26717 231 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CCND2P30279 289 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ADSSP30520 456 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 HK2P52789 917 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TNFAIP2Q03169 654 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CLCQ05315 142 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 BNIP2Q12982 314 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 LRRC41Q15345 812 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZFP69Q49AA0 526 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 AGAP6Q5VW22 663 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 GTF2IRD2BQ6EKJ0 949 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 FRMD7Q6ZUT3 714 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 GTF2IRD2Q86UP8 949 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZBTB46Q86UZ6 589 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 UNC45BQ8IWX7 931 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PACRGLQ8N7B6 248 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 MFSD2AQ8NA29 543 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 INTS12Q96CB8 462 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 HDAC11Q96DB2 347 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 BTN2A3PQ96KV6 586 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 SAMD11Q96NU1 681 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 AGAP4Q96P64 663 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PAFAH2Q99487 392 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 MCMBPQ9BTE3 642 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRPV6Q9H1D0 765 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms