RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
CD44-208ENST00000428726 ZNF789Q5FWF6 425 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 EFHC1Q5JVL4 640 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 BTBD8Q5XKL5 378 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 RINLQ6ZS11 566 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 TAS1R1Q7RTX1 841 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 UNC93AQ86WB7 457 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 ZDHHC17Q8IUH5 632 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 CCNYL1Q8N7R7 359 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 DQX1Q8TE96 717 aaKnown RBP8.56□□□□□ -1.04
CD44-208ENST00000428726 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 WDR55Q9H6Y2 383 aaPredicted RBP8.56□□□□□ -1.04
CD44-208ENST00000428726 WDR6Q9NNW5 1121 aaKnown RBP8.56□□□□□ -1.04
CD44-208ENST00000428726 DONSONQ9NYP3 566 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 DNAJC16Q9Y2G8 782 aa8.56□□□□□ -1.04
CD44-208ENST00000428726 DCAF8L1A6NGE4 600 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TMEM233B4DJY2 109 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 XPO1O14980 1071 aaKnown RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 KRT37O76014 449 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TCN1P20061 433 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 PTPN3P26045 913 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 NOS2P35228 1153 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 ABL2P42684 1182 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 SLC5A3P53794 718 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 NME5P56597 212 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 ITGA7Q13683 1181 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PDE1CQ14123 709 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 CRYMQ14894 314 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CNGA3Q16281 694 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 ESRP1Q6NXG1 681 aaKnown RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 RGS9BPQ6ZS82 235 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PAF1Q8N7H5 531 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CNTD1Q8N815 330 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 MCUQ8NE86 351 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 C10orf82Q8WW14 230 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 ARNTL2Q8WYA1 636 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 FCRL2Q96LA5 508 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 MIPEPQ99797 713 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 SPC25Q9HBM1 224 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TLR9Q9NR96 1032 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PRKAG3Q9UGI9 489 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TRPV2Q9Y5S1 764 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CFAP73A6NFT4 308 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PAGE1O75459 146 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 BAG2O95816 211 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CHRNGP07510 517 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CPB1P15086 417 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 SLC25A3Q00325 362 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 FYB2Q5VWT5 728 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 NXNQ6DKJ4 435 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TLDC1Q6P9B6 456 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PTAR1Q7Z6K3 402 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 SPATA2LQ8IUW3 424 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 CDKL3Q8IVW4 592 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 ZNF276Q8N554 614 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 DCBLD1Q8N8Z6 715 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 ZSCAN18Q8TBC5 510 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 SPATA13Q96N96 652 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 NPY6RQ99463 290 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 HNRNPABQ99729 332 aaKnown RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 ZNF670Q9BS34 389 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 DHRS4Q9BTZ2 278 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TRIM55Q9BYV6 548 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 FRMD8Q9BZ67 464 aaPredicted RBP8.55□□□□□ -1.04
CD44-208ENST00000428726 ABCG8Q9H221 673 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CRISPLD1Q9H336 500 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 NT5MQ9NPB1 228 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 CHST12Q9NRB3 414 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 STAP1Q9ULZ2 295 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 PLA2G4CQ9UP65 541 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 RALGAPA2Q2PPJ7 1873 aa8.55□□□□□ -1.04
CD44-208ENST00000428726 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 PRR5-ARHGAP8B1AHC4 643 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 FCHO1O14526 889 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CHADO15335 359 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 TADA2AO75478 443 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 SPAG6O75602 509 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 USP1O94782 785 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ZWINTO95229 277 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 MBTPS1Q14703 1052 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CCDC6Q16204 474 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 UPP1Q16831 310 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 HSF5Q4G112 596 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 ALFQ53S48 1182 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 TMEM198Q66K66 360 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 RAP1GAP2Q684P5 730 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 RNF43Q68DV7 783 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 SLC41A1Q8IVJ1 513 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 FAM13CQ8NE31 585 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms