RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MZF1P28698 734 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CHRNA3P32297 505 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CD70P32970 193 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ACVRL1P37023 503 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 GARSP41250 739 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 FNTAP49354 379 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 DGKGP49619 791 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 YBEYP58557 167 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZP2Q05996 745 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 AP1B1Q10567 949 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 LMAN2Q12907 356 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC10A2Q12908 348 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 BYSLQ13895 437 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCNG2Q16589 344 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC45A4Q5BKX6 768 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 FSCBQ5H9T9 825 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 AFMIDQ63HM1 303 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 GRAMD4Q6IC98 578 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 B4GALNT4Q76KP1 1039 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 GSTA5Q7RTV2 222 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF572Q7Z3I7 529 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 C12orf40Q86WS4 652 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARHGAP12Q8IWW6 846 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 TP53INP2Q8IXH6 220 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC44A3Q8N4M1 653 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 C12orf50Q8NA57 414 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 DCAF4L2Q8NA75 395 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 OR7D4Q8NG98 312 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 OR52K2Q8NGK3 314 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC35B2Q8TB61 432 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARHGEF2Q92974 986 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 NKD2Q969F2 451 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 KRT12Q99456 494 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 LGMNQ99538 433 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 C2orf49Q9BVC5 232 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC2A11Q9BYW1 496 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC39A8Q9C0K1 460 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 DDX47Q9H0S4 455 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 MAGEH1Q9H213 219 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 LRRC19Q9H756 370 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 C10orf88Q9H8K7 445 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 PRKAG3Q9UGI9 489 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 IPO11Q9UI26 975 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 GGA2Q9UJY4 613 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 DNPEPQ9ULA0 475 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CLEC4EQ9ULY5 219 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 HPCAL4Q9UM19 191 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 BRWD1Q9NSI6 2320 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 HELZP42694 1942 aaKnown RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 ANAPC1Q9H1A4 1944 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 NUP210Q8TEM1 1887 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 HACD1B0YJ81 288 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 KCNK1O00180 336 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 RNF103O00237 685 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 KCNN4O15554 427 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 SNAP91O60641 907 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF189O75820 626 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 NEBLO76041 1014 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 ECEL1O95672 775 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 IFNB1P01574 187 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 HLA-FP30511 346 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 COILP38432 576 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 KCNJ1P48048 391 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 SOX9P48436 509 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CLCN6P51797 869 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 DR1Q01658 176 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PFKPQ01813 784 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PPIDQ08752 370 aaKnown RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 XRCC4Q13426 336 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 SERINC3Q13530 473 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 TDGQ13569 410 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PRKD1Q15139 912 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CYP1B1Q16678 543 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PLEKHG6Q3KR16 790 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 FUT11Q495W5 492 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 HEATR6Q6AI08 1181 aaKnown RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 TIGD7Q6NT04 549 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 C8orf74Q6P047 294 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 TTC27Q6P3X3 843 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC137Q6PK04 289 aaKnown RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 LEKR1Q6ZMV7 388 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARHGAP36Q6ZRI8 547 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 ETFBKMTQ8IXQ9 262 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC13Q8IYE1 715 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC89Q8N998 374 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 FAM71DQ8N9W8 422 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 LRRN4CLQ8ND94 238 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 GRK7Q8WTQ7 553 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 NSMCE1Q8WV22 266 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 DNASE1L2Q92874 299 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms