RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 MYO1AQ9UBC5 1043 aa14□□□□□ -0.17
SNX3-204ENST00000426155 CNOT8Q9UFF9 292 aaKnown RBP14□□□□□ -0.17
SNX3-204ENST00000426155 VPS28Q9UK41 221 aa14□□□□□ -0.17
SNX3-204ENST00000426155 CAPN11Q9UMQ6 739 aa14□□□□□ -0.17
SNX3-204ENST00000426155 PCDHGA5Q9Y5G8 931 aa14□□□□□ -0.17
SNX3-204ENST00000426155 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 AP5Z1O43299 807 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 SRPRAP08240 638 aaKnown RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 ACADMP11310 421 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 CD6P30203 668 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 E2F5Q15329 346 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 AASDHQ4L235 1098 aaPredicted RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 C9orf64Q5T6V5 341 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 PLEKHA7Q6IQ23 1121 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 GPR161Q8N6U8 529 aaKnown RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 CNPY3Q9BT09 278 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.99□□□□□ -0.17
SNX3-204ENST00000426155 GPR174Q9BXC1 333 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 ZYG11BQ9C0D3 744 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 FSCN3Q9NQT6 498 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 WSB2Q9NYS7 404 aaPredicted RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 OR12D3Q9UGF7 316 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 SERGEFQ9UGK8 458 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 VPS51Q9UID3 782 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 LUC7L2Q9Y383 392 aaKnown RBP13.99□□□□□ -0.17
SNX3-204ENST00000426155 PCDH15Q96QU1 1955 aa13.99□□□□□ -0.17
SNX3-204ENST00000426155 EDDM13A0A1B0GTR0 161 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ANKRD62A6NC57 917 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 RTN2O75298 545 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 LRIG2O94898 1065 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 MT-CO1P00395 513 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 SERPING1P05155 500 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ZNF806P0C7X5 589 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 GZMAP12544 262 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 PSMA2P25787 234 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 MAOBP27338 520 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 OR1E1P30953 314 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ID4P47928 161 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 METAP1P53582 386 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 LMNB2Q03252 620 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ZNF33AQ06730 810 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ARL13BQ3SXY8 428 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 DAB2IPQ5VWQ8 1189 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 SLC36A4Q6YBV0 504 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 TMC6Q7Z403 805 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 METTL3Q86U44 580 aaKnown RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 MMAAQ8IVH4 418 aaKnown RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 STK40Q8N2I9 435 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ARFGAP1Q8N6T3 406 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 C12orf50Q8NA57 414 aaPredicted RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 FRS2Q8WU20 508 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 PTPRN2Q92932 1015 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 NTAN1Q96AB6 310 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 VCPIP1Q96JH7 1222 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 PEBP4Q96S96 227 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ISCUQ9H1K1 167 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 RSPH9Q9H1X1 276 aaPredicted RBP13.98□□□□□ -0.17
SNX3-204ENST00000426155 VPS45Q9NRW7 570 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 PARVAQ9NVD7 372 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 GPATCH2LQ9NWQ4 482 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ARHGAP20Q9P2F6 1191 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 SUN2Q9UH99 717 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 SLC25A13Q9UJS0 675 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 ACTL7AQ9Y615 435 aa13.98□□□□□ -0.17
SNX3-204ENST00000426155 A0A087X0T9 212 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 K7ERQ8 282 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 MID1O15344 667 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 NDUFS2O75306 463 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 IGLV3-19P01714 112 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 DNTTP04053 509 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 FAM228BP0C875 321 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SRCP12931 536 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 ACSL1P33121 698 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 PSMD8P48556 350 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 OXCT1P55809 520 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SULT2A1Q06520 285 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SCAPQ12770 1279 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 C6orf118Q5T5N4 469 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 Q6ZVU0 165 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SLFN11Q7Z7L1 901 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SETD3Q86TU7 594 aaPredicted RBP13.97□□□□□ -0.17
SNX3-204ENST00000426155 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 KDM1BQ8NB78 822 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
SNX3-204ENST00000426155 TBC1D31Q96DN5 1066 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 FAM129BQ96TA1 746 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 OSBPL2Q9H1P3 480 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 PPARGC1AQ9UBK2 798 aaKnown RBP13.97□□□□□ -0.17
SNX3-204ENST00000426155 DNAI1Q9UI46 699 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 PILRBQ9UKJ0 227 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 FZD10Q9ULW2 581 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 TMEM131Q92545 1883 aa13.97□□□□□ -0.17
SNX3-204ENST00000426155 DOCK9Q9BZ29 2069 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms