RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TKTL1P51854 596 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 MUM1Q2TAK8 710 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM72AQ5TYM5 149 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM72DQ6L9T8 149 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 MRPL10Q7Z7H8 261 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM72BQ86X60 149 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ENDOVQ8N8Q3 282 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 OR52K1Q8NGK4 314 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 MICAL1Q8TDZ2 1067 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 SENP8Q96LD8 212 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 SH3GL3Q99963 347 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 MKS1Q9NXB0 559 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 DNAJC16Q9Y2G8 782 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 TDRD15B5MCY1 1934 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 ITM2AO43736 263 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 B4GALT3O60512 393 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 ITGA2BP08514 1039 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 NOS2P35228 1153 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 PBX3P40426 434 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 OR1G1P47890 313 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 GJA8P48165 433 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 WASHC5Q12768 1159 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CBLBQ13191 982 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 THOC5Q13769 683 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 LRRC26Q2I0M4 334 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 STEAP4Q687X5 459 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 MARK2Q7KZI7 788 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 ARCQ7LC44 396 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CMC1Q7Z7K0 106 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.91□□□□□ -0.662e-6■■■■■ 29.2
CUX1-205ENST00000425244 DNAAF3Q8N9W5 541 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 HNRNPABQ99729 332 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 APOL2Q9BQE5 337 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 ULBP1Q9BZM6 244 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 THAP1Q9NVV9 213 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 PCDHB7Q9Y5E2 793 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 MEI4A8MW99 385 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 PRR5-ARHGAP8B1AHC4 643 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 ENPP3O14638 875 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 NRP1O14786 923 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 BIRC5O15392 142 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 SNNO75324 88 aaPredicted RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 LMNAP02545 664 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 PDHA1P08559 390 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 MLNP12872 115 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CNTFP26441 200 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 TYK2P29597 1187 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 RPL34P49207 117 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 ARHGAP8P85298 464 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 NIPAL4Q0D2K0 466 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 UPP1Q16831 310 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 C1QTNF12Q5T7M4 302 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 KYAT3Q6YP21 454 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 CLEC20AQ6ZU45 233 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.91□□□□□ -0.666e-7■■■■■ 139.2
CUX1-205ENST00000425244 RBM15BQ8NDT2 890 aaKnown RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 SEPT8Q92599 483 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CLPTM1LQ96KA5 538 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 RCOR3Q9P2K3 495 aaPredicted RBP10.91□□□□□ -0.66
CUX1-205ENST00000425244 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 EMCNQ9ULC0 261 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 SNX10Q9Y5X0 201 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
CUX1-205ENST00000425244 CHD7Q9P2D1 2997 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 CCDC78A2IDD5 438 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 SPECC1L-ADORA2AF8WAN1 911 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.66
CUX1-205ENST00000425244 ALDH1A2O94788 518 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 DDHD2O94830 711 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 FAM200BP0CF97 657 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 SKIP12755 728 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 CCNG1P51959 295 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 TIFABQ6ZNK6 161 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 PAQR9Q6ZVX9 377 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 C10orf107Q8IVU9 208 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 MAB21L3Q8N8X9 362 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 AZIN2Q96A70 460 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 ZNF669Q96BR6 464 aaPredicted RBP10.9□□□□□ -0.66
CUX1-205ENST00000425244 FAM193BQ96PV7 902 aaPredicted RBP10.9□□□□□ -0.66
CUX1-205ENST00000425244 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 NPY6RQ99463 290 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 THTPAQ9BU02 230 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 DDX43Q9NXZ2 648 aaKnown RBP10.9□□□□□ -0.66
CUX1-205ENST00000425244 STOML1Q9UBI4 398 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 YJEFN3A6XGL0 299 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 CAPN14A8MX76 684 aa10.9□□□□□ -0.66
CUX1-205ENST00000425244 E7ENQ6 273 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms