RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 MTSS1LQ765P7 747 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 TFAP2DQ7Z6R9 452 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 ZNF354CQ86Y25 554 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 MFSD6LQ8IWD5 586 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 YAF2Q8IY57 180 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 CCDC13Q8IYE1 715 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 BBS5Q8N3I7 341 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 CARNMT1Q8N4J0 409 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 ATPAF2Q8N5M1 289 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 FAM71DQ8N9W8 422 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 LRRN4CLQ8ND94 238 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 ELSPBP1Q96BH3 223 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 RTP4Q96DX8 246 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 CELF6Q96J87 481 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 PPP1R2P1Q96PQ5 205 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 LGMNQ99538 433 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 FAM118BQ9BPY3 351 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 PARD6BQ9BYG5 372 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 KLC2Q9H0B6 622 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 TSPYL1Q9H0U9 437 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 SMG9Q9H0W8 520 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 LINC00597Q9H2U6 94 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 PCDH9Q9HC56 1237 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 DUS2Q9NX74 493 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 WHRNQ9P202 907 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 ASIC3Q9UHC3 531 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 DMGDHQ9UI17 866 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 IPO11Q9UI26 975 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 HELZP42694 1942 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 UQCRHLA0A096LP55 91 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 CXorf51AA0A1B0GTR3 108 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 ZSCAN5CA6NGD5 496 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 HEPACAM2A8MVW5 462 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 PSMD3O43242 534 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 KDELR3O43731 214 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 MFSD11O43934 449 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 OPHN1O60890 802 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 TBX10O75333 385 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 ERLIN1O75477 346 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 NEBLO76041 1014 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 LUC7L3O95232 432 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 PRAMEF12O95522 483 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 NFATC1O95644 943 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 UQCRHP07919 91 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 RHOCP08134 193 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 VIPR2P41587 438 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 GAD2Q05329 585 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 SLC20A2Q08357 652 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 USP4Q13107 963 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 SERINC3Q13530 473 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 CDH18Q13634 790 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 PRKD1Q15139 912 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 PARP6Q2NL67 630 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 PREPLQ4J6C6 727 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 TEX44Q53QW1 395 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 IL31Q6EBC2 164 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 TPGS1Q6ZTW0 290 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 CEP128Q6ZU80 1094 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 PID1Q7Z2X4 250 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 ARHGAP12Q8IWW6 846 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 DEPDC1BQ8WUY9 529 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 IFT81Q8WYA0 676 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 SEC14L1Q92503 715 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 NXPE3Q969Y0 559 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 P2RY11Q96G91 374 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 ZNF599Q96NL3 588 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
MDC1-205ENST00000425072 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 SPON2Q9BUD6 331 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 BBS2Q9BXC9 721 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 GDF3Q9NR23 364 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 ZNF212Q9UDV6 495 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.57□□□□□ -0.72
MDC1-205ENST00000425072 RAB21Q9UL25 225 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 NEU3Q9UQ49 428 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 FAM50BQ9Y247 325 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 NEU2Q9Y3R4 380 aa10.57□□□□□ -0.72
MDC1-205ENST00000425072 V9GYY5 206 aaPredicted RBP10.57□□□□□ -0.72
MDC1-205ENST00000425072 NUP210Q8TEM1 1887 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 GOLGA6CA6NDK9 693 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 GOLGA6BA6NDN3 693 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 NRG2O14511 850 aaPredicted RBP10.56□□□□□ -0.72
MDC1-205ENST00000425072 MAFKO60675 156 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ECI2O75521 394 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 ADH1CP00326 375 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 JCHAINP01591 159 aa10.56□□□□□ -0.72
MDC1-205ENST00000425072 GOLGA6DP0CG33 693 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms