RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MCRS1Q96EZ8 462 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 IL36RNQ9UBH0 155 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 MAGED2Q9UNF1 606 aaPredicted RBP5.18□□□□□ -1.58
LINC01040-201ENST00000425048 DOCK7Q96N67 2140 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 M0QYT0 321 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 CER1O95813 267 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 UMODP07911 640 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 KLRC2P26717 231 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 GRK5P34947 590 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
LINC01040-201ENST00000425048 CMASQ8NFW8 434 aaPredicted RBP5.17□□□□□ -1.58
LINC01040-201ENST00000425048 TTC8Q8TAM2 541 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 FAM216AQ8WUB2 273 aa5.17□□□□□ -1.58
LINC01040-201ENST00000425048 FAM234BA2RU67 622 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 SNRNP70P08621 437 aaKnown RBP5.16□□□□□ -1.58
LINC01040-201ENST00000425048 ARL13AQ5H913 290 aaPredicted RBP5.16□□□□□ -1.58
LINC01040-201ENST00000425048 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 C14orf80Q86SX3 495 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 TCP11L2Q8N4U5 519 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 TMED6Q8WW62 240 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 REXO5Q96IC2 774 aaKnown RBP5.16□□□□□ -1.58
LINC01040-201ENST00000425048 APOLD1Q96LR9 279 aa5.16□□□□□ -1.58
LINC01040-201ENST00000425048 DDX21Q9NR30 783 aaKnown RBP eCLIP5.16□□□□□ -1.58
LINC01040-201ENST00000425048 IGLV2-11P01706 119 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 PEPDP12955 493 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 AVPR1AP37288 418 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 AMTP48728 403 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 GRM4Q14833 912 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 ZRSR1Q15695 479 aaKnown RBP5.15□□□□□ -1.59
LINC01040-201ENST00000425048 MRGPRG-AS1Q2M3A8 158 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 TRABD2AQ86V40 505 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 IGSF21Q96ID5 467 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 ZNF333Q96JL9 665 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 FIZ1Q96SL8 496 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 EPS8L2Q9H6S3 715 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 TCF7L2Q9NQB0 619 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 STARD7Q9NQZ5 370 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 RAB21Q9UL25 225 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 ZBTB1Q9Y2K1 713 aa5.15□□□□□ -1.59
LINC01040-201ENST00000425048 KCNJ13O60928 360 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 GLP2RO95838 553 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 ANXA6P08133 673 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 PRIM2P49643 509 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 NUDT6P53370 316 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 TUBA1BP68363 451 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 TRAF3Q13114 568 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 HNF4GQ14541 408 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 TMEM71Q6P5X7 295 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 FBXO38Q6PIJ6 1188 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 DSTYKQ6XUX3 929 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 RFLNBQ8N5W9 214 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 LRRC57Q8N9N7 239 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 WDR60Q8WVS4 1066 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 KLHL31Q9H511 634 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 CCDC134Q9H6E4 229 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 ACTR5Q9H9F9 607 aaPredicted RBP5.14□□□□□ -1.59
LINC01040-201ENST00000425048 TRPC5Q9UL62 973 aaPredicted RBP5.14□□□□□ -1.59
LINC01040-201ENST00000425048 RAP2CQ9Y3L5 183 aa5.14□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3DA0A087WVF3 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3IA0A087WXS9 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3EA0A087X179 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3KA0A087X1G2 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3BA6NDS4 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3FA6NER0 549 aaPredicted RBP5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3LB9A6J9 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 BUB3O43684 328 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 SP1P08047 785 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 F7P08709 466 aaPredicted RBP5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3HP0C7X1 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 GNLYP22749 145 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 ITGB8P26012 769 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 RBM6P78332 1123 aaKnown RBP5.13□□□□□ -1.59
LINC01040-201ENST00000425048 RHAGQ02094 409 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 PLK5Q496M5 336 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 ZNF569Q5MCW4 686 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 VWA5B1Q5TIE3 1220 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 ARL6IP4Q66PJ3 421 aaKnown RBP5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3GQ6DHY5 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3CQ6IPX1 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 HEPHL1Q6MZM0 1159 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 ANKS1BQ7Z6G8 1248 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TBC1D3Q8IZP1 549 aaPredicted RBP5.13□□□□□ -1.59
LINC01040-201ENST00000425048 TMEM217Q8N7C4 229 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 NECTIN3Q9NQS3 549 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 OCIAD1Q9NX40 245 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
LINC01040-201ENST00000425048 DAOP14920 347 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 NAGAP17050 411 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 TMPRSS3P57727 454 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 DDR1Q08345 913 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 GRSF1Q12849 480 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC01040-201ENST00000425048 HIBCHQ6NVY1 386 aaPredicted RBP5.12□□□□□ -1.59
LINC01040-201ENST00000425048 TMEM200AQ86VY9 491 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 FAM110DQ8TAY7 271 aaPredicted RBP5.12□□□□□ -1.59
LINC01040-201ENST00000425048 SLC35F5Q8WV83 523 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 BRI3BPQ8WY22 251 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 TIFAQ96CG3 184 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 IL25Q9H293 177 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 HIPK3Q9H422 1215 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 SLC52A1Q9NWF4 448 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms