RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 SLC39A13Q96H72 371 aa16.65■□□□□ 0.26
PUDP-203ENST00000424830 ARHGAP20Q9P2F6 1191 aa16.65■□□□□ 0.26
PUDP-203ENST00000424830 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 PRAMEF26H0Y7S4 382 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
PUDP-203ENST00000424830 SIGLEC6O43699 453 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 RTN2O75298 545 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 MT-CO3P00414 261 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 KRT85P78386 507 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 FKBP3Q00688 224 aaKnown RBP16.64■□□□□ 0.25
PUDP-203ENST00000424830 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
PUDP-203ENST00000424830 BROXQ5VW32 411 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 RAP1GAP2Q684P5 730 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 TAC4Q86UU9 113 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 TRIM69Q86WT6 500 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 FAM131CQ96AQ9 280 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
PUDP-203ENST00000424830 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
PUDP-203ENST00000424830 C1QTNF3-AMACRE9PGA6 284 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 F5H5T6 163 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 FYNP06241 537 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 VAV1P15498 845 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 PDGFRAP16234 1089 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 TACR2P21452 398 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 BRD2P25440 801 aaKnown RBP16.63■□□□□ 0.25
PUDP-203ENST00000424830 UCNP55089 124 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 TMPRSS3P57727 454 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 KLHDC7BQ96G42 594 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 BTN2A3PQ96KV6 586 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 ZNF578Q96N58 590 aaPredicted RBP16.63■□□□□ 0.25
PUDP-203ENST00000424830 NT5C1BQ96P26 610 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 ZSWIM1Q9BR11 485 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 RMND1Q9NWS8 449 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 XPO7Q9UIA9 1087 aaKnown RBP16.63■□□□□ 0.25
PUDP-203ENST00000424830 COL6A6A6NMZ7 2263 aa16.63■□□□□ 0.25
PUDP-203ENST00000424830 DOCK9Q9BZ29 2069 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 TRIM38O00635 465 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 RNGTTO60942 597 aaKnown RBP16.62■□□□□ 0.25
PUDP-203ENST00000424830 METAP1P53582 386 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 OXCT1P55809 520 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 TTC39BQ5VTQ0 682 aaPredicted RBP16.62■□□□□ 0.25
PUDP-203ENST00000424830 BEND5Q7L4P6 421 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 LSMEM2Q8N112 164 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 PPM1KQ8N3J5 372 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 OR4C6Q8NH72 309 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 SLC25A13Q9UJS0 675 aa16.62■□□□□ 0.25
PUDP-203ENST00000424830 J3QKU1 62 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ALOX15BO15296 676 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ZNF202O95125 648 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ZNF18P17022 549 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ACADSBP45954 432 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 NUMBP49757 651 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 RHDQ02161 417 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 CETN1Q12798 172 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 CNTN1Q12860 1018 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ACCSLQ4AC99 568 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ZC3H12AQ5D1E8 599 aaKnown RBP16.61■□□□□ 0.25
PUDP-203ENST00000424830 RABGAP1LQ5R372 815 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 AGBL4Q5VU57 503 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 SYPL2Q5VXT5 272 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 CCAR2Q8N163 923 aaKnown RBP16.61■□□□□ 0.25
PUDP-203ENST00000424830 SLC25A45Q8N413 288 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 ATP6V0D2Q8N8Y2 350 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 FRS2Q8WU20 508 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 NAF1Q96HR8 494 aaKnown RBP16.61■□□□□ 0.25
PUDP-203ENST00000424830 DEPDC7Q96QD5 511 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 PREBQ9HCU5 417 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 PCDHB1Q9Y5F3 818 aa16.61■□□□□ 0.25
PUDP-203ENST00000424830 MYO18BQ8IUG5 2567 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 A0A1B0GVM2 712 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 TCAF2A6NFQ2 919 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 KCNU1A8MYU2 1149 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
PUDP-203ENST00000424830 FFAR2O15552 330 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 THEGLP0DJG4 465 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 ALPPL2P10696 532 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 DGKAP23743 735 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 PRCPP42785 496 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 FMO5P49326 533 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
PUDP-203ENST00000424830 PLK1P53350 603 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 GABREP78334 506 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 POM121L1PQ3SYA9 428 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 PCSK4Q6UW60 755 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
PUDP-203ENST00000424830 POPDC2Q9HBU9 364 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 METTL14Q9HCE5 456 aaKnown RBP16.6■□□□□ 0.25
PUDP-203ENST00000424830 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 EVA1BQ9NVM1 165 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 KLHL11Q9NVR0 708 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 SARDHQ9UL12 918 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 PPM1HQ9ULR3 514 aa16.6■□□□□ 0.25
PUDP-203ENST00000424830 CA5BQ9Y2D0 317 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms