RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 NUP205Q92621 2012 aa10.23□□□□□ -0.77
HDLBP-209ENST00000422933 OTOL1A6NHN0 477 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 FAM170BA6NMN3 283 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 USP27XA6NNY8 438 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CBX4O00257 560 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CST8O60676 142 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CISD3P0C7P0 127 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 TCP1P17987 556 aaKnown RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 HLA-FP30511 346 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PTPN7P35236 360 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 OPRD1P41143 372 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CSKP41240 450 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CDKN2BP42772 138 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PEX5P50542 639 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 SGSHP51688 502 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 ARSEP51690 589 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PLK1P53350 603 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 MRPS21P82921 87 aaKnown RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 ECT2LQ008S8 904 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 LMAN2Q12907 356 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 DPYSQ14117 519 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PDK1Q15118 436 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PLEKHG6Q3KR16 790 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 HSF5Q4G112 596 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 TMEM196Q5HYL7 178 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PITRM1Q5JRX3 1037 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 MBLAC2Q68D91 279 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 MFSD7Q6UXD7 560 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 NLRP14Q86W24 1093 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 ATPAF2Q8N5M1 289 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CCNYQ8ND76 341 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CASKIN2Q8WXE0 1202 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 TSC1Q92574 1164 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 KRT35Q92764 455 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CHFRQ96EP1 664 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 CCDC114Q96M63 670 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 FEM1AQ9BSK4 669 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 MAGEB5Q9BZ81 275 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 TBC1D17Q9HA65 648 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 SP110Q9HB58 689 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 HOMER3Q9NSC5 361 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 SIT1Q9Y3P8 196 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 FARP1Q9Y4F1 1045 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-209ENST00000422933 HEY1Q9Y5J3 304 aa10.22□□□□□ -0.77
HDLBP-209ENST00000422933 hCG_1818297A0A087WSY0 165 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 A0A0A0MRY4 1105 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 CXorf51AA0A1B0GTR3 108 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 RASA4BC9J798 803 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 ENC1O14682 589 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DCLK1O15075 740 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 RASA4O43374 803 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 CEP104O60308 925 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 STK10O94804 968 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 SRPRAP08240 638 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 CD48P09326 243 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DLDP09622 509 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 PYGMP11217 842 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 CD70P32970 193 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DEKP35659 375 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 PAFAH1B1P43034 410 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 RECQLP46063 649 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 ETF1P62495 437 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DYNLT1P63172 113 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 NHLH1Q02575 133 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 STARD3Q14849 445 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 PAFAH1B3Q15102 231 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 ACCSLQ4AC99 568 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 FNDC3BQ53EP0 1204 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 RNF43Q68DV7 783 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 C12orf40Q86WS4 652 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 DCAF4L2Q8NA75 395 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 PCDH19Q8TAB3 1148 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 ARHGEF2Q92974 986 aaKnown RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 FAF2Q96CS3 445 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 IER2Q9BTL4 223 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 FRMD8P1Q9BZ68 369 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-209ENST00000422933 LMAN1LQ9HAT1 526 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 LTB4R2Q9NPC1 389 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 SUN2Q9UH99 717 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 STARD13Q9Y3M8 1113 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 SAR1BQ9Y6B6 198 aa10.21□□□□□ -0.77
HDLBP-209ENST00000422933 KIAA1549LQ6ZVL6 1849 aa10.21□□□□□ -0.78
HDLBP-209ENST00000422933 F5P12259 2224 aa10.21□□□□□ -0.78
HDLBP-209ENST00000422933 GOLGA6L10A0A0M3HER8 536 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 TMEM221A6NGB7 291 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 APOC4-APOC2K7ER74 178 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 M0R296 226 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 CES2O00748 559 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 MCF2LO15068 1137 aa10.2□□□□□ -0.78
HDLBP-209ENST00000422933 MTSS1O43312 755 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms