RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 C1RP00736 705 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ETS1P14921 441 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ATXN1P54253 815 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 MORF4L2Q15014 288 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 MAP3K21Q5TCX8 1036 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PRR23CQ6ZRP0 262 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 GLT6D1Q7Z4J2 308 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 POLNQ7Z5Q5 900 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DQX1Q8TE96 717 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RUBCNQ92622 972 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PPP1R16AQ96I34 528 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PPP1R10Q96QC0 940 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RAD9AQ99638 391 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 SEMA3CQ99985 751 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 BRD8Q9H0E9 1235 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 WWOXQ9NZC7 414 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 TRHDEQ9UKU6 1024 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CNTRLQ7Z7A1 2325 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ESRRAP11474 423 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PTPN7P35236 360 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ADRA1BP35368 520 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DAOAP59103 153 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CYP4F8P98187 520 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 INCA1Q0VD86 236 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 BOP1Q14137 746 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 FAM83EQ2M2I3 478 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 SETMARQ53H47 684 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 WDR93Q6P2C0 686 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DDX1Q92499 740 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 hCG_1818297A0A087WSY0 165 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 TCRBV7S2A1N4TA0A589 114 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 C9IYK1 514 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 FGF19O95750 216 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RPL21P46778 160 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 NRIP1P48552 1158 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CLDN10P78369 228 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 KDSRQ06136 332 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CAPRIN1Q14444 709 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 TBCCQ15814 346 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 UGT3A1Q6NUS8 523 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CES3Q6UWW8 571 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.828e-8■■■■■ 44.2
CMSS1-201ENST00000421999 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DNAJB7Q7Z6W7 309 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 C11orf96Q7Z7L8 435 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CCNJLQ8IV13 435 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RAB3IPQ96QF0 476 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 SPATA16Q9BXB7 569 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 COG4Q9H9E3 785 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DRG1Q9Y295 367 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 C2CD4BA6NLJ0 364 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 GNGT2O14610 69 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 DDX3YO15523 660 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 GALTP07902 379 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CTSEP14091 401 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 MSH3P20585 1137 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RFC2P35250 354 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PPP2R2AP63151 447 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 RFX8Q6ZV50 586 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 SH2D3CQ8N5H7 860 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ST13P5Q8NFI4 369 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 FNIP1Q8TF40 1166 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 BTN2A3PQ96KV6 586 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 TGS1Q96RS0 853 aaKnown RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 C1QTNF7Q9BXJ2 289 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 PCDH18Q9HCL0 1135 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 CRTAC1Q9NQ79 661 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 MARCOQ9UEW3 520 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-201ENST00000421999 SRCAPQ6ZRS2 3230 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 NCF1BA6NI72 391 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 NCF1CA8MVU1 366 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 IFRD1O00458 451 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 VAPBO95292 243 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 PIRTP0C851 137 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 HOXD8P13378 290 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 NCF1P14598 390 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 MPP3Q13368 585 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 BRMS1LQ5PSV4 323 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 BBS12Q6ZW61 710 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CEP68Q76N32 757 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 TRAPPC5Q8IUR0 188 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 SDCCAG3Q96C92 435 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 ZIM3Q96PE6 472 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 VAT1Q99536 393 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 GPR62Q9BZJ7 368 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 VRTNQ9H8Y1 702 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 TLR9Q9NR96 1032 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 ZNF212Q9UDV6 495 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 LNPEPQ9UIQ6 1025 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 GOLGA8TH3BQL2 631 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 FSCN2O14926 492 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CD48P09326 243 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CD86P42081 329 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 MAPK9P45984 424 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 GLRBP48167 497 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 USP45Q70EL2 814 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 OTOAQ7RTW8 1153 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms