RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 DHRS4L1P0CG22 281 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 MPSTP25325 297 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 GRK4P32298 578 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 ABL2P42684 1182 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NR2C2P49116 596 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NME5P56597 212 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 DAOAP59103 153 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 MPP3Q13368 585 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 GRM3Q14832 879 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 RIPOR1Q6ZS17 1223 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NPY6RQ99463 290 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 GJB3O75712 270 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 C2P06681 752 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PGAM1P18669 254 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 GCKP35557 465 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 OCRLQ01968 901 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PTPRCAPQ14761 206 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 FAM110CQ1W6H9 321 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 ARL13BQ3SXY8 428 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 SPDYAQ5MJ70 313 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 ESRP1Q6NXG1 681 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 LAYNQ6UX15 382 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 SCUBE1Q8IWY4 988 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 DEFB107AQ8IZN7 70 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 OR6P1Q8NGX9 317 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 NRG4Q8WWG1 115 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 CYP2S1Q96SQ9 504 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 HNRNPABQ99729 332 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 FSD1LQ9BXM9 530 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 RUVBL2Q9Y230 463 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PTPRFP10586 1907 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 NVLO15381 856 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 HNRNPLP14866 589 aaKnown RBP eCLIP13.62□□□□□ -0.235e-9■■■■■ 27.5
MCF2L-213ENST00000421756 CD68P34810 354 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 TUBP50607 506 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PKNOX1P55347 436 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 CCDC15Q0P6D6 951 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 ALKAL1Q6UXT8 129 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 STRADAQ7RTN6 431 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 HPS6Q86YV9 775 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 FAM156AQ8NDB6 213 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PHF21BQ96EK2 531 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 SLC27A5Q9Y2P5 690 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 OPHN1O60890 802 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 FDFT1P37268 417 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PCLAFQ15004 111 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 PARP6Q2NL67 630 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 ANKRD20A4Q4UJ75 823 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 SLC9B1Q4ZJI4 515 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 TEDDM1Q5T9Z0 273 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 MAPK15Q8TD08 544 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 INPP5DQ92835 1189 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 CATSPER2Q96P56 530 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 NMRK2Q9NPI5 230 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 THAP1Q9NVV9 213 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 MOCS1Q9NZB8 636 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 SUFUQ9UMX1 484 aa13.62□□□□□ -0.23
MCF2L-213ENST00000421756 GNEQ9Y223 722 aaKnown RBP13.62□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF638Q14966 1978 aaKnown RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 IQCA1LA6NCM1 817 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 C9JVG2 144 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF865P0CJ78 1059 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 CRHR1P34998 444 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 GP5P40197 560 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PNPLA4P41247 253 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 OR1G1P47890 313 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 CPT1AP50416 773 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 SDCCAG8Q86SQ7 713 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 NT5DC4Q86YG4 428 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ZDHHC17Q8IUH5 632 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PSTKQ8IV42 348 aaKnown RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 OR52B2Q96RD2 323 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 EPAS1Q99814 870 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 RBM22Q9NW64 420 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■■□ 20.2
MCF2L-213ENST00000421756 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ANK1P16157 1881 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 MGEA5O60502 916 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PSMG1O95456 288 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 CRYBB1P53674 252 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 SLC39A12Q504Y0 691 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 C6orf163Q5TEZ5 329 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 LPCAT4Q643R3 524 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 TMEM154Q6P9G4 183 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms