RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ADCY8P40145 1251 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 VPS41P49754 854 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PGFP49763 221 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 TBX4P57082 545 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 TPI1P60174 286 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PLD1Q13393 1074 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PON2Q15165 354 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 TRIP13Q15645 432 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 BRMS1LQ5PSV4 323 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 DRICH1Q6PGQ1 229 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CEP68Q76N32 757 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PDZD8Q8NEN9 1154 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PCDH19Q8TAB3 1148 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CSPG4P5Q96PW8 444 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 EPAS1Q99814 870 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 NACA2Q9H009 215 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 PRDM16Q9HAZ2 1276 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 RCOR3Q9P2K3 495 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLC12A6Q9UHW9 1150 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 MOCS2O96007 188 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 IFNB1P01574 187 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 APOEP02649 317 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 IL4RP24394 825 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 SCAPQ12770 1279 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 PTK6Q13882 451 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 TRADDQ15628 312 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 KCTD19Q17RG1 926 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 DGKKQ5KSL6 1271 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 MSANTD2Q6P1R3 559 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 GAREM2Q75VX8 874 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 ZC3H18Q86VM9 953 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 RALGPS2Q86X27 583 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 PQLC3Q8N755 202 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 CCDC89Q8N998 374 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLCO2A1Q92959 643 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 OSER1Q9NX31 292 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 TRPM5Q9NZQ8 1165 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 MARCH2Q9P0N8 246 aa13.55□□□□□ -0.24
HLA-DMB-258ENST00000418107 SDK1Q7Z5N4 2213 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLC12A8A0AV02 714 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 ITGAVP06756 1048 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 HMBSP08397 361 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 MYBL2P10244 700 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 RBP3P10745 1247 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 NR2C2P49116 596 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 PLTPP55058 493 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 TNK2Q07912 1038 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 CCDC6Q16204 474 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 GPR158Q5T848 1215 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 RFX8Q6ZV50 586 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 BZW1Q7L1Q6 419 aaKnown RBP13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 HDXQ7Z353 690 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 ITIH5Q86UX2 942 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 WDR5BQ86VZ2 330 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 MIB1Q86YT6 1006 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 ALLCQ8N6M5 410 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLC35B2Q8TB61 432 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 CCHCR1Q8TD31 782 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 OVCA2Q8WZ82 227 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 SNF8Q96H20 258 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 GDAP1L1Q96MZ0 367 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 TMEM121Q9BTD3 319 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 ATXN3LQ9H3M9 355 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 UXTQ9UBK9 157 aaPredicted RBP13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 OR12D3Q9UGF7 316 aa13.54□□□□□ -0.24
HLA-DMB-258ENST00000418107 RALGAPA1Q6GYQ0 2036 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 AXIN1O15169 862 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 TLR5O60602 858 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 PAGE1O75459 146 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 TBX18O95935 607 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 IGLV3-25P01717 112 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 GABRR2P28476 465 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 ACTN2P35609 894 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 RPL21P46778 160 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 CCINQ13939 588 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 NOMO1Q15155 1222 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 SF3A2Q15428 464 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 OASLQ15646 514 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms