RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OXCT1P55809 520 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 NXPH1P58417 271 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 EFHC1Q5JVL4 640 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 PDZD3Q86UT5 571 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 OR52K2Q8NGK3 314 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 RNF34Q969K3 372 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 PPP1R13BQ96KQ4 1090 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 FAM81BQ96LP2 452 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 RPRD1AQ96P16 312 aaPredicted RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 COX16Q9P0S2 106 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 SARDHQ9UL12 918 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 PCDHGC3Q9UN70 934 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 PCDHGA1Q9Y5H4 931 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 OR51B4Q9Y5P0 310 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TLR4O00206 839 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 ENC1O14682 589 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 ATP9BO43861 1147 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 HSF2BPO75031 334 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 RTN2O75298 545 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 GRAP2O75791 330 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 LDOC1O95751 146 aaPredicted RBP15.25■□□□□ 0.03
RPS28-201ENST00000417088 CENPCQ03188 943 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 AUHQ13825 339 aaKnown RBP15.25■□□□□ 0.03
RPS28-201ENST00000417088 SLC45A4Q5BKX6 768 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 NAPEPLDQ6IQ20 393 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 TMPRSS12Q86WS5 348 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 PDCD7Q8N8D1 485 aaKnown RBP15.25■□□□□ 0.03
RPS28-201ENST00000417088 OR8D1Q8WZ84 308 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 SHC3Q92529 594 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 CNDP2Q96KP4 475 aaKnown RBP15.25■□□□□ 0.03
RPS28-201ENST00000417088 PPP1R9BQ96SB3 815 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 FEM1AQ9BSK4 669 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 KDM4CQ9H3R0 1056 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 ARHGAP20Q9P2F6 1191 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 APEX2Q9UBZ4 518 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 RWDD2AQ9UIY3 292 aa15.25■□□□□ 0.03
RPS28-201ENST00000417088 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 ASXL3Q9C0F0 2248 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 IGSF10Q6WRI0 2623 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 YKT6O15498 198 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 SLC7A4O43246 635 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 PLRG1O43660 514 aaKnown RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 EPHA8P29322 1005 aaPredicted RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 GGCXP38435 758 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 RXRGP48443 463 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 ARRB1P49407 418 aaPredicted RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 CLDN6P56747 220 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 BNIP3Q12983 259 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 DNAJC3Q13217 504 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 NME3Q13232 169 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 DLG2Q15700 870 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 ACCSLQ4AC99 568 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 FAM46CQ5VWP2 391 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 OR6B2Q6IFH4 312 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 GBP6Q6ZN66 633 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 C11orf57Q6ZUT1 292 aaPredicted RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 FAM183BPQ6ZVS7 135 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 DSG4Q86SJ6 1040 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 C14orf80Q86SX3 495 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 PRPF39Q86UA1 669 aaKnown RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 CREBRFQ8IUR6 639 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 EID2Q8N6I1 236 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 MFSD2AQ8NA29 543 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 ERVMER34-1Q9H9K5 563 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 SCUBE2Q9NQ36 999 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 VANGL2Q9ULK5 521 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 PPM1HQ9ULR3 514 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
RPS28-201ENST00000417088 NYNRINQ9P2P1 1898 aaKnown RBP15.24■□□□□ 0.03
RPS28-201ENST00000417088 ARID1BQ8NFD5 2236 aaPredicted RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 E9PAM4 449 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 MCF2LO15068 1137 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 PAGE1O75459 146 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 RFPL3O75679 317 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 ERBB2P04626 1255 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 PON1P27169 355 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 MAT2AP31153 395 aaKnown RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 CNTN1Q12860 1018 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 MTA1Q13330 715 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 ZNF177Q13360 481 aaPredicted RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 ACAP1Q15027 740 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 EXOC3L4Q17RC7 722 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 SOWAHCQ53LP3 525 aaPredicted RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 AGBL4Q5VU57 503 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 Q6ZVU0 165 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 SLC26A9Q7LBE3 791 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 IRF2BP1Q8IU81 584 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 C1orf131Q8NDD1 294 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms