RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DPPA5A6NC42 116 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PCP4L1A6NKN8 68 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 EML1O00423 815 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PDE9AO76083 593 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ITGAXP20702 1163 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 KDELR1P24390 212 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 THPOP40225 353 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ARHGEF6Q15052 776 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ZNF540Q8NDQ6 660 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 RMI1Q9H9A7 625 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 C17orf75Q9HAS0 396 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PLGRKTQ9HBL7 147 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 KCND1Q9NSA2 647 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ZNF180Q9UJW8 692 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 E9PCH4 1651 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 C4BPBP20851 252 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 RHOAP61586 193 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ZNF554Q86TJ5 538 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 HTRA1Q92743 480 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 DDX43Q9NXZ2 648 aaKnown RBP12.24□□□□□ -0.45
UBR4-205ENST00000417040 VPS28Q9UK41 221 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 BTBD3Q9Y2F9 522 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 LIASO43766 372 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 FAM155BO75949 473 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 MYL12AP19105 171 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 BST1Q10588 318 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 BOP1Q14137 746 aaKnown RBP12.24□□□□□ -0.45
UBR4-205ENST00000417040 PTPN20Q4JDL3 420 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
UBR4-205ENST00000417040 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 RHOCP08134 193 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 FGFR1P11362 822 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 EPHA3P29320 983 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PRKCQQ04759 706 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
UBR4-205ENST00000417040 C16orf59Q7L2K0 433 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PPP1R13LQ8WUF5 828 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 REXO5Q96IC2 774 aaKnown RBP12.24□□□□□ -0.45
UBR4-205ENST00000417040 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 IQCMA0A1B0GVH7 501 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 C17orf102A2RUQ5 167 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 E5RJQ4 531 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 GSTM5P46439 218 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ABATP80404 500 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 SPIDRQ14159 915 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 GLB1LQ6UWU2 654 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 SETD9Q8NE22 299 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 PPP1R14AQ96A00 147 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 NAT9Q9BTE0 207 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 MYOZ2Q9NPC6 264 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 SLC25A13Q9UJS0 675 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 COMMD3-BMI1R4GMX3 469 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CCDC182A6NF36 153 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 IFNA14P01570 189 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 TUBP50607 506 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 STX4Q12846 297 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 BROXQ5VW32 411 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
UBR4-205ENST00000417040 DET1Q7L5Y6 550 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 GLT6D1Q7Z4J2 308 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 TXNRD3Q86VQ6 643 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
UBR4-205ENST00000417040 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 UBXN8O00124 270 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CRATP43155 626 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 PSME3P61289 254 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 USP4Q13107 963 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 MAMLD1Q13495 774 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 AP5B1Q2VPB7 878 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ABRAXAS1Q6UWZ7 409 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CRELD2Q6UXH1 353 aaPredicted RBP12.23□□□□□ -0.45
UBR4-205ENST00000417040 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ERVK-5Q9HDB9 667 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ADPRHL2Q9NX46 363 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 MAGEB16A2A368 324 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 TPD52L2O43399 206 aaKnown RBP12.23□□□□□ -0.45
UBR4-205ENST00000417040 LINC00032P0C843 101 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 MTTPP55157 894 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CAMKK1Q8N5S9 505 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ALLCQ8N6M5 410 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 OR56A4Q8NGH8 313 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 PIWIL2Q8TC59 973 aaKnown RBP12.23□□□□□ -0.45
UBR4-205ENST00000417040 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CAB39LQ9H9S4 337 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 LYVE1Q9Y5Y7 322 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 A0A087X1B8 175 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 TBKBP1A7MCY6 615 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 LACTBL1A8MY62 500 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 PRR5-ARHGAP8B1AHC4 643 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ITGALP20701 1170 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 CDH3P22223 829 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ARHGAP8P85298 464 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
UBR4-205ENST00000417040 ARMC6Q6NXE6 501 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms