RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 OMA1Q96E52 524 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 RNF157Q96PX1 679 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 REXO4Q9GZR2 422 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 PLA2G6O60733 806 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 VPS26AO75436 327 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 TMEM63AO94886 807 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 NFICP08651 508 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 USP46P62068 366 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DACT2Q5SW24 774 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ANKS3Q6ZW76 656 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 TMEM109Q9BVC6 243 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CCDC130P13994 396 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RGS2P41220 211 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RPL5P46777 297 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CCT8P50990 548 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 C21orf59P57076 290 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 MAGEE2Q8TD90 523 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 FAR2Q96K12 515 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 KCTD14Q9BQ13 255 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CEP44Q9C0F1 390 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 MYRFQ9Y2G1 1151 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CRYL1Q9Y2S2 319 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PRR23AA6NEV1 266 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 DDHD2O94830 711 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 ADSSP30520 456 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 AQP4P55087 323 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RAB14P61106 215 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CTBP1Q13363 440 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 VPS72Q15906 364 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 TSPAN14Q8NG11 270 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 TBCDQ9BTW9 1192 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 ACTR8Q9H981 624 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 KRT84Q9NSB2 600 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SNTG2Q9NY99 539 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 C6orf203Q9P0P8 240 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 EFCAB14O75071 495 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PCNAP12004 261 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SLC2A4P14672 509 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CCR1P32246 355 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CENPAP49450 140 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CDH13P55290 713 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PRKAA1Q13131 559 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SLC2A14Q8TDB8 520 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 AZIN2Q96A70 460 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CCDC126Q96EE4 140 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CIB1Q99828 191 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 YIPF2Q9BWQ6 316 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SLC7A8Q9UHI5 535 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 CNOT3O75175 753 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 LDLRP01130 860 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 GOT1P17174 413 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 ALOX12P18054 663 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RPS7P62081 194 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RALGDSQ12967 914 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
SCN1B-202ENST00000415950 KCTD4Q8WVF5 259 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 PPM1HQ9ULR3 514 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 SPATA2Q9UM82 520 aa13.11□□□□□ -0.31
SCN1B-202ENST00000415950 KANSL1LA0AUZ9 987 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 C2orf81A6NN90 581 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 TM7SF2O76062 418 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 RBP1P09455 135 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 GPC1P35052 558 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 COPS5Q92905 334 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms