RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 OR6Y1Q8NGX8 325 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 XAGE5Q8WWM1 108 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CCDC47Q96A33 483 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 TMEM125Q96AQ2 219 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 PDLIM5Q96HC4 596 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 REXO5Q96IC2 774 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 FAM167AQ96KS9 214 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 UROC1Q96N76 676 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 REEP2Q9BRK0 252 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 MRPL44Q9H9J2 332 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 NOD2Q9HC29 1040 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 PDE7BQ9NP56 450 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 MOCS1Q9NZB8 636 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 FBXO4Q9UKT5 387 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 TRIM17Q9Y577 477 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 SNX14Q9Y5W7 946 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CDY1Q9Y6F8 540 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 FAM237BA0A1B0GVD1 139 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CSH1P0DML2 217 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CSH2P0DML3 217 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 KCNA2P16389 499 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 EPHA8P29322 1005 aaPredicted RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 HOXA11P31270 313 aaPredicted RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 PBX1P40424 430 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CHN2P52757 468 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 EPHB3P54753 998 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CREB5Q02930 508 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CALD1Q05682 793 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 CHAF1BQ13112 559 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 MTFR2Q6P444 385 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 WDR73Q6P4I2 378 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 ISLR2Q6UXK2 745 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 TMTC3Q6ZXV5 915 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 RAB11FIP2Q7L804 512 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 NLRX1Q86UT6 975 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 UNC5BQ8IZJ1 945 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 METTL25Q8N6Q8 603 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 ZNF775Q96BV0 537 aaPredicted RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 SPATA17Q96L03 361 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 LENG8Q96PV6 779 aaPredicted RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 FNBP1Q96RU3 617 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 TRIB1Q96RU8 372 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 TESK2Q96S53 571 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 KLHL14Q9P2G3 628 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CPSF2Q9P2I0 782 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 CNOT7Q9UIV1 285 aaKnown RBP2.73□□□□□ -1.97
MCF2-204ENST00000414978 PADI1Q9ULC6 663 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 USP22Q9UPT9 525 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 TMEM5Q9Y2B1 443 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 CYP46A1Q9Y6A2 500 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 MYH13Q9UKX3 1938 aa2.73□□□□□ -1.97
MCF2-204ENST00000414978 ARHGEF37A1IGU5 675 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 OR14I1A6ND48 311 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A18PA6NE21 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A16PA6NEW6 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A9PA6NNJ1 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A5PA8MXJ8 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 CLGNO14967 610 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 PPM1DO15297 605 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 RNMTO43148 476 aaKnown RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 B4GALT4O60513 344 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 IGLV1-40P01703 118 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 RHOP08100 348 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A15PP0C7V4 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 FAM90A14PP0C7W9 464 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 SPATA31D3P0C874 917 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 MSX2P35548 267 aaPredicted RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 GARSP41250 739 aaKnown RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 GSTM5P46439 218 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 GPR15P49685 360 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 CEBPZQ03701 1054 aaKnown RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 PRKCQQ04759 706 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 NFE2L1Q14494 772 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 IRF3Q14653 427 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 PUM1Q14671 1186 aaKnown RBP eCLIP2.72□□□□□ -1.97
MCF2-204ENST00000414978 IQCB1Q15051 598 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 PPA1Q15181 289 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 LETM2Q2VYF4 491 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 MGAT5BQ3V5L5 792 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 TPGS2Q68CL5 300 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 OTUD7BQ6GQQ9 843 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 TAPT1Q6NXT6 567 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 SPATA31D4Q6ZUB0 917 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 ZDHHC13Q8IUH4 622 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 RPAP2Q8IXW5 612 aaPredicted RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 ADSSL1Q8N142 457 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 NGEFQ8N5V2 710 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 SIPA1Q96FS4 1042 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 TAB2Q9NYJ8 693 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 AKAP7Q9P0M2 348 aaPredicted RBP2.72□□□□□ -1.97
MCF2-204ENST00000414978 DNAJB9Q9UBS3 223 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 TBX20Q9UMR3 447 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 CNTN6Q9UQ52 1028 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 KNSTRNQ9Y448 316 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 IRS2Q9Y4H2 1338 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 RTL9Q8NET4 1388 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 ZNF804BA4D1E1 1349 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 DCLK1O15075 740 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 ASAP2O43150 1006 aa2.72□□□□□ -1.97
MCF2-204ENST00000414978 SEC31AO94979 1220 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms