RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FGBP02675 491 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ADRA1BP35368 520 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 NOVP48745 357 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 FSTL1Q12841 308 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 LONP2Q86WA8 852 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 UBE2E3Q969T4 207 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 FBXL18Q96ME1 805 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 MRPL45Q9BRJ2 306 aaKnown RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 STXBP5LQ9Y2K9 1186 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 C4BP0C0L5 1744 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 WDR27A2RRH5 827 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 KCNK1O00180 336 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ADH1CP00326 375 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 LPPQ93052 612 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TEKT2Q9UIF3 430 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TBC1D30Q9Y2I9 924 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 A0A096LPK6 155 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TLL1O43897 1013 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TRIM16O95361 564 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 SERPIND1P05546 499 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ERCC2P18074 760 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 CYLC2Q14093 348 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF470Q6ECI4 717 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 MON1BQ7L1V2 547 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 PTAR1Q7Z6K3 402 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TTC30BQ8N4P2 665 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 PRELID2Q8N945 189 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 JADE3Q92613 823 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ELOVL6Q9H5J4 265 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 COPS7BQ9H9Q2 264 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 FNIP2Q9P278 1114 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 GPR25O00155 361 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 INHAP05111 366 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TPSB2P20231 275 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 CCR3P51677 355 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TPSAB1Q15661 275 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 MPPE1Q53F39 396 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 HGSNATQ68CP4 663 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 FBXO39Q8N4B4 442 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 LEMD2Q8NC56 503 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ADAM32Q8TC27 787 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TMEM175Q9BSA9 504 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF536O15090 1300 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 C15orf38-AP3S2A0A0A6YYH1 394 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 VAPBO95292 243 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ELNP15502 786 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 RHOQP17081 205 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 FECHP22830 423 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 RXRGP48443 463 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 RAD23BP54727 409 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 PRKCQQ04759 706 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 CSHL1Q14406 222 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF792Q3KQV3 632 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ARPINQ7Z6K5 226 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 XYLT1Q86Y38 959 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 BHMTQ93088 406 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 NKD2Q969F2 451 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 KCTD5Q9NXV2 234 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 GTF2IRD1Q9UHL9 959 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 GNPTGQ9UJJ9 305 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 H0Y3Z8 333 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 TSPAN3O60637 253 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 CXCL14O95715 111 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 CATP04040 527 aaKnown RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 HALP42357 657 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF844Q08AG5 666 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 RAP1GAP2Q684P5 730 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 SRLQ86TD4 932 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 PCDH18Q9HCL0 1135 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 SPASTQ9UBP0 616 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ATG7O95352 703 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 PFKMP08237 780 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 RPL22P35268 128 aaKnown RBP12.17□□□□□ -0.46
PTPRF-205ENST00000414879 GCKP35557 465 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 MAPKAPK2P49137 400 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ACLYP53396 1101 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 NOMO1Q15155 1222 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 QRFPRQ96P65 431 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 ECSITQ9BQ95 431 aa12.17□□□□□ -0.46
PTPRF-205ENST00000414879 NLNQ9BYT8 704 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms