RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SETSIPP0DME0 302 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 CKMT1AP12532 417 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 DGKAP23743 735 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 GTF2H1P32780 548 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 STK19P49842 368 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 MXI1P50539 228 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 TBX4P57082 545 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 MCCD1P59942 119 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 SKOR1P84550 965 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 ECT2LQ008S8 904 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 SGO2Q562F6 1265 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 MS4A13Q5J8X5 152 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 KRT39Q6A163 491 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 IGF2-ASQ6U949 168 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 PRPF39Q86UA1 669 aaKnown RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 APCDD1Q8J025 514 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 TMEM145Q8NBT3 493 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 FBXL13Q8NEE6 735 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 UBA3Q8TBC4 463 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 AZIN2Q96A70 460 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 PAGE5Q96GU1 130 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 VCPIP1Q96JH7 1222 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 RPL10LQ96L21 214 aaKnown RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 FCRL2Q96LA5 508 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.87□□□□□ -0.83
RFFL-203ENST00000413582 DPH1Q9BZG8 443 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 CAAP1Q9H8G2 361 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 THSD1Q9NS62 852 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 HESX1Q9UBX0 185 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 SERTAD1Q9UHV2 236 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 U3KQA8 63 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 LRRK2Q5S007 2527 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 PRAMEF26H0Y7S4 382 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 K7ENP7 123 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 MOCS3O95396 460 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 LTFP02788 710 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 GP1BAP07359 652 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 KRT10P13645 584 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 LCP1P13796 627 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 CD19P15391 556 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 NDUFA8P51970 172 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 NNTQ13423 1086 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 STAT4Q14765 748 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 POM121L1PQ3SYA9 428 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 SETMARQ53H47 684 aaPredicted RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 HS1BP3Q53T59 392 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 DCAF6Q58WW2 860 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 KIAA1614Q5VZ46 1190 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 RNF219Q5W0B1 726 aaPredicted RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 INO80CQ6PI98 192 aaPredicted RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 TMC6Q7Z403 805 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 ELOA2Q8IYF1 753 aaPredicted RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 CEP57L1Q8IYX8 460 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 CFAP52Q8N1V2 620 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 GPT2Q8TD30 523 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 CLEC4CQ8WTT0 213 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 EEF2KMTQ96G04 330 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 TIGD1Q96MW7 591 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 SPAG5Q96R06 1193 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 DDX50Q9BQ39 737 aaKnown RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 TRPM6Q9BX84 2022 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 KLHL11Q9NVR0 708 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 RAB20Q9NX57 234 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 TJP2Q9UDY2 1190 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 USP25Q9UHP3 1055 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 XPO7Q9UIA9 1087 aaKnown RBP9.86□□□□□ -0.83
RFFL-203ENST00000413582 SARDHQ9UL12 918 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 CEP83Q9Y592 693 aa9.86□□□□□ -0.83
RFFL-203ENST00000413582 PIK3R2O00459 728 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 PIAS2O75928 621 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 LETM1O95202 739 aaPredicted RBP9.85□□□□□ -0.83
RFFL-203ENST00000413582 THEGLP0DJG4 465 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 MYF5P13349 255 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 PSMC2P35998 433 aaKnown RBP9.85□□□□□ -0.83
RFFL-203ENST00000413582 NUMBP49757 651 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 RGS7P49802 495 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 CSRP3P50461 194 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 CNTN1Q12860 1018 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 ZCWPW2Q504Y3 356 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 C3orf38Q5JPI3 329 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 PMF1Q6P1K2 205 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 CCDC117Q8IWD4 279 aaPredicted RBP9.85□□□□□ -0.83
RFFL-203ENST00000413582 UBR7Q8N806 425 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 DQX1Q8TE96 717 aaKnown RBP9.85□□□□□ -0.83
RFFL-203ENST00000413582 KLHDC7BQ96G42 594 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 SLC39A13Q96H72 371 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 CCDC34Q96HJ3 373 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 APOLD1Q96LR9 279 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 SERPINB11Q96P15 392 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 PREBQ9HCU5 417 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 NLGN3Q9NZ94 848 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 SATB2Q9UPW6 733 aa9.85□□□□□ -0.83
RFFL-203ENST00000413582 BSNQ9UPA5 3926 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms