RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 CCAR2Q8N163 923 aaKnown RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 SLC25A45Q8N413 288 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 BAP1Q92560 729 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 GSDMAQ96QA5 445 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TSG101Q99816 390 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 METTL14Q9HCE5 456 aaKnown RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RMND1Q9NWS8 449 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TEX51A0A1B0GUA7 166 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 A0A1B0GVM2 712 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 TCAF2A6NFQ2 919 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 SIGLEC6O43699 453 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 ATP9BO43861 1147 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 TRUB2O95900 331 aaKnown RBP12.53□□□□□ -0.4
LIMS2-210ENST00000413578 APOEP02649 317 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 GIMD1P0DJR0 217 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 GLDCP23378 1020 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 ACADSBP45954 432 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 TAS2R38P59533 333 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-210ENST00000413578 TMEM110Q86TL2 294 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
LIMS2-210ENST00000413578 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-210ENST00000413578 SPACA3Q8IXA5 215 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-210ENST00000413578 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 OR52K2Q8NGK3 314 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 POPDC2Q9HBU9 364 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 CEP83Q9Y592 693 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
LIMS2-210ENST00000413578 F5H5T6 163 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 PRAMEF26H0Y7S4 382 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 ALOX15BO15296 676 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 MAGEC1O60732 1142 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 SDC3O75056 442 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 MT-CO3P00414 261 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 PLA2G2AP14555 144 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.41
LIMS2-210ENST00000413578 NNMTP40261 264 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 NUMBP49757 651 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 CNTN1Q12860 1018 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 TTC39BQ5VTQ0 682 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-210ENST00000413578 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 FBXL22Q6P050 247 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 GPR155Q7Z3F1 870 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 CEP63Q96MT8 703 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.41
LIMS2-210ENST00000413578 CA5BQ9Y2D0 317 aa12.52□□□□□ -0.41
LIMS2-210ENST00000413578 TP53BP1Q12888 1972 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-210ENST00000413578 LY6G6EA0A0G2JKS1 128 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 E5RJQ4 531 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 CAPN9O14815 690 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 MCF2LO15068 1137 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
LIMS2-210ENST00000413578 CTSLP07711 333 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 ACTN2P35609 894 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 IRAK1P51617 712 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 OXCT1P55809 520 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
LIMS2-210ENST00000413578 E2F1Q01094 437 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 STAT4Q14765 748 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 TAF5Q15542 800 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 SETMARQ53H47 684 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-210ENST00000413578 PIP5KL1Q5T9C9 394 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 FAM46CQ5VWP2 391 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 DSG4Q86SJ6 1040 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 ATP6V0D2Q8N8Y2 350 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 OR8D1Q8WZ84 308 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 ERCC4Q92889 916 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-210ENST00000413578 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 FEM1AQ9BSK4 669 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 PREBQ9HCU5 417 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 KLHL11Q9NVR0 708 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 UCKL1Q9NWZ5 548 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 PCDHB1Q9Y5F3 818 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 U3KQA8 63 aa12.51□□□□□ -0.41
LIMS2-210ENST00000413578 LZTS3O60299 673 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-210ENST00000413578 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
LIMS2-210ENST00000413578 CKMT1AP12532 417 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms