RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 C5orf34Q96MH7 638 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 ITPAQ9BY32 194 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF341Q9BYN7 854 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 RANBP17Q9H2T7 1088 aaKnown RBP5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 BRF2Q9HAW0 419 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 SYBUQ9NX95 663 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 IL1RAPL1Q9NZN1 696 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 SEMA5BQ9P283 1151 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 TBC1D29Q9UFV1 150 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 VPS28Q9UK41 221 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 PKP3Q9Y446 797 aa5.17□□□□□ -1.58
HMGB3P31-201ENST00000413333 RSF1Q96T23 1441 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 COL4A3Q01955 1670 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 STRNO43815 780 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF500O60304 480 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 HBP1O60381 514 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF202O95125 648 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 CBX6O95503 412 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 SCGB1D1O95968 90 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 HNRNPCP07910 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 COX7A2P14406 83 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 TGM2P21980 687 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 RPS6KB1P23443 525 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 NFKBIAP25963 317 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 TYK2P29597 1187 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 MLH1P40692 756 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 CPA2P48052 419 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADPRHP54922 357 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 HOXA4Q00056 320 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 DMWDQ09019 674 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 LARS2Q15031 903 aaKnown RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 SLC18A3Q16572 532 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 PFKFB3Q16875 520 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 FBXO43Q4G163 708 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 GLE1Q53GS7 698 aaKnown RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF667Q5HYK9 610 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 MIIPQ5JXC2 388 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 TMEM63BQ5T3F8 832 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 CEP85Q6P2H3 762 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 GJB7Q6PEY0 223 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 RANBP10Q6VN20 620 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 TRIM72Q6ZMU5 477 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 MDGA2Q7Z553 956 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 C16orf71Q8IYS4 520 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADSSL1Q8N142 457 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 GHDCQ8N2G8 530 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 FAM110DQ8TAY7 271 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ATP2A3Q93084 1043 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 HIC2Q96JB3 615 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 KLHL15Q96M94 604 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 CCDC68Q9H2F9 335 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 SEPT11Q9NVA2 429 aaKnown RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 NSMCE4AQ9NXX6 385 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 FOXJ2Q9P0K8 574 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 SH3BP4Q9P0V3 963 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 PEMTQ9UBM1 199 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 HDAC6Q9UBN7 1215 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADD3Q9UEY8 706 aaKnown RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 FBXO4Q9UKT5 387 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 SIRT4Q9Y6E7 314 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 KDM3AQ9Y4C1 1321 aa5.16□□□□□ -1.58
HMGB3P31-201ENST00000413333 TCRBV7S3A2A0A539 114 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 NPIPB15A6NHN6 443 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 MCIDASD6RGH6 385 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 TNFSF14O43557 240 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 CEP104O60308 925 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 CHRM4P08173 479 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 MAKP20794 623 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 PSMA4P25789 261 aaKnown RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 ABCD1P33897 745 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 RAD52P43351 418 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 PTPN9P43378 593 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 MTNR1AP48039 350 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 RARSP54136 660 aaKnown RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF169Q14929 603 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 RILPL1Q5EBL4 403 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 CFAP58Q5T655 872 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 TTLL5Q6EMB2 1281 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 IKBIPQ70UQ0 350 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 BRINP3Q76B58 766 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 RRM2BQ7LG56 351 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 RHPN2Q8IUC4 686 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 OR8H2Q8N162 312 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 PLD5Q8N7P1 536 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 CREB3L4Q8TEY5 395 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 HSPH1Q92598 858 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 USP6NLQ92738 828 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 PDLIM2Q96JY6 352 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 NR1H4Q96RI1 486 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 PIP5K1AQ99755 562 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 CADM1Q9BY67 442 aaKnown RBP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 FTOQ9C0B1 505 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 IL17RBQ9NRM6 502 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 UPB1Q9UBR1 384 aa5.15□□□□□ -1.59
HMGB3P31-201ENST00000413333 TCRBV5S1A1TA0A578 114 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 C17orf100A8MU93 164 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 GTPBP1O00178 669 aaKnown RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 TGFB1I1O43294 461 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMCC2O75069 709 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms