RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TMEM209Q96SK2 561 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 PYM1Q9BRP8 204 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CBWD1Q9BRT8 395 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 TBC1D17Q9HA65 648 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 MAGEF1Q9HAY2 307 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 PDE11AQ9HCR9 933 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ASAH2Q9NR71 780 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ARHGEF3Q9NR81 526 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 FAM86C1Q9NVL1 165 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 RBAKQ9NYW8 714 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 HOOK1Q9UJC3 728 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 DSEQ9UL01 958 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 F5P12259 2224 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ATG2BQ96BY7 2078 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 COL4A2P08572 1712 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 PIEZO1Q92508 2521 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 COL4A3Q01955 1670 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 WDFY4Q6ZS81 3184 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 HELZP42694 1942 aaKnown RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF233A6NK53 670 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 PATE3B3GLJ2 98 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 EIF3DO15371 548 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 HUS1O60921 280 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 MOSPD3O75425 235 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 SOAT2O75908 522 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 KRT19P08727 400 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 TMEM191BP0C7N4 346 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 EPB41P11171 864 aaKnown RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 PFKFB1P16118 471 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 CASP1P29466 404 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 HOXD13P35453 343 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 USP8P40818 1118 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 STARD6P59095 220 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 AMPD2Q01433 879 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 TSPY1Q01534 308 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 PFKPQ01813 784 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 BFSP1Q12934 665 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 CASP8Q14790 479 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 TEAD2Q15562 447 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 MLF2Q15773 248 aaPredicted RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 MGAT5BQ3V5L5 792 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 SLC39A12Q504Y0 691 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 SLC44A4Q53GD3 710 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 FAM78AQ5JUQ0 283 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 GK5Q6ZS86 529 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 UNC13DQ70J99 1090 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 APTXQ7Z2E3 356 aaKnown RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF572Q7Z3I7 529 aaPredicted RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ITIH5Q86UX2 942 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF575Q86XF7 245 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 DCP2Q8IU60 420 aaKnown RBP5.59□□□□□ -1.51
LINC00342-201ENST00000412393 CBWD2Q8IUF1 395 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 TMTC1Q8IUR5 882 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 C10orf67Q8IYJ2 551 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 CSGALNACT2Q8N6G5 542 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 LRRC52Q8N7C0 313 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 OR10T2Q8NGX3 314 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ELSPBP1Q96BH3 223 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ANKRD36BP1Q96IX9 119 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 C7orf25Q9BPX7 421 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 PLA2G2FQ9BZM2 168 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 GPR88Q9GZN0 384 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ZCWPW1Q9H0M4 648 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 BLZF1Q9H2G9 400 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 BRD9Q9H8M2 597 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ZFP14Q9HCL3 533 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 INTS13Q9NVM9 706 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 HSFX1Q9UBD0 423 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 ASB3Q9Y575 518 aa5.59□□□□□ -1.51
LINC00342-201ENST00000412393 UBE4BO95155 1302 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 A0A1B0GVL5 298 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 PVALEFA0A1B0GWK0 134 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 KANSL1LA0AUZ9 987 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 AKR1B15C9JRZ8 316 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CLIC2O15247 247 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 GPR42O15529 346 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TGFB1I1O43294 461 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 KIF5CO60282 957 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CYP7B1O75881 506 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SEC31AO94979 1220 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SERPINC1P01008 464 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 TNNC2P02585 160 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 DCNP07585 359 aaKnown RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CD3EP07766 207 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 HAPLN1P10915 354 aaPredicted RBP5.58□□□□□ -1.52
LINC00342-201ENST00000412393 IMPDH2P12268 514 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ATP1A3P13637 1013 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 PRLRP16471 622 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 ATF6P18850 670 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 CD247P20963 164 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 FCARP24071 287 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 GABRR2P28476 465 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 VIPR2P41587 438 aa5.58□□□□□ -1.52
LINC00342-201ENST00000412393 SYKP43405 635 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms