RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 FGFR3P22607 806 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 SLC11A1P49279 550 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 CERCAMQ5T4B2 595 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.06■■□□□ 1.6
VRK2-202ENST00000412104 SLC39A13Q96H72 371 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 CHKBQ9Y259 395 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 ALDOAP04075 364 aaKnown RBP25.06■■□□□ 1.6
VRK2-202ENST00000412104 ITGA2BP08514 1039 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 ALDH3A1P30838 453 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 ARPP19P56211 112 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 PIK3R6Q5UE93 754 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 NAPEPLDQ6IQ20 393 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 KLHDC8BQ8IXV7 354 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 RTL3Q8N8U3 475 aaKnown RBP25.06■■□□□ 1.6
VRK2-202ENST00000412104 ZNF419Q96HQ0 510 aaPredicted RBP25.06■■□□□ 1.6
VRK2-202ENST00000412104 MECRQ9BV79 373 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 MYLK2Q9H1R3 596 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 IL37Q9NZH6 218 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 MPP6Q9NZW5 540 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 LRFN2Q9ULH4 789 aa25.06■■□□□ 1.6
VRK2-202ENST00000412104 ZCWPW2A0A1B0GU75 182 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 TPP1O14773 563 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 KLF11O14901 512 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 ATP9BO43861 1147 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 SOAT2O75908 522 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 NPY2RP49146 381 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 FRG1Q14331 258 aaKnown RBP25.05■■□□□ 1.6
VRK2-202ENST00000412104 SETDB1Q15047 1291 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 TCTN1Q2MV58 587 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 AFMIDQ63HM1 303 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 ZNF398Q8TD17 642 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 ACMSDQ8TDX5 336 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 SEPT8Q92599 483 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 IL12RB2Q99665 862 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 TMEM51Q9NW97 253 aa25.05■■□□□ 1.6
VRK2-202ENST00000412104 TET1Q8NFU7 2136 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 FKTNO75072 461 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 DCTN3O75935 186 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 TOP3BO95985 862 aaKnown RBP25.04■■□□□ 1.6
VRK2-202ENST00000412104 IL1BP01584 269 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 ALDH2P05091 517 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 CPB1P15086 417 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 GP5P40197 560 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 MLLT6P55198 1093 aaPredicted RBP25.04■■□□□ 1.6
VRK2-202ENST00000412104 TBX4P57082 545 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 ANKRD20A4Q4UJ75 823 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 FUT10Q6P4F1 479 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.04■■□□□ 1.6
VRK2-202ENST00000412104 ZNF296Q8WUU4 475 aaPredicted RBP25.04■■□□□ 1.6
VRK2-202ENST00000412104 ERP27Q96DN0 273 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 C1orf74Q96LT6 269 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 CPNE1Q99829 537 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 SEZ6LQ9BYH1 1024 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 IL22Q9GZX6 179 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 TXNDC16Q9P2K2 825 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 MAGED2Q9UNF1 606 aaPredicted RBP25.04■■□□□ 1.6
VRK2-202ENST00000412104 FAM237BA0A1B0GVD1 139 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 FAM92AA1XBS5 289 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 C2CD2LO14523 706 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 MATN3O15232 486 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 PSMD3O43242 534 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 SLC2A3P11169 496 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 YWHAQP27348 245 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 CDH17Q12864 832 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 RFWD2Q8NHY2 731 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 FBXO32Q969P5 355 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 MFSD3Q96ES6 412 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 LRRC37BQ96QE4 947 aa25.04■■□□□ 1.6
VRK2-202ENST00000412104 MTMR11A4FU01 709 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 PITPNM1O00562 1244 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 EFEMP1Q12805 493 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 NLRP9Q7RTR0 991 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 LINC00523Q86TU6 105 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 TRIM42Q8IWZ5 723 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 SPATA22Q8NHS9 363 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 SH3TC2Q8TF17 1288 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 FCRL5Q96RD9 977 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 TRIM55Q9BYV6 548 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 SIRPGQ9P1W8 387 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 SLC27A5Q9Y2P5 690 aa25.03■■□□□ 1.6
VRK2-202ENST00000412104 AAR2Q9Y312 384 aaKnown RBP25.03■■□□□ 1.6
VRK2-202ENST00000412104 MAGEB16A2A368 324 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 CFAP73A6NFT4 308 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 WASH4PA8MWX3 477 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 TPH1P17752 444 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 TIGD7Q6NT04 549 aaPredicted RBP25.02■■□□□ 1.6
VRK2-202ENST00000412104 RSPO2Q6UXX9 243 aaPredicted RBP25.02■■□□□ 1.6
VRK2-202ENST00000412104 NPAS4Q8IUM7 802 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 CRISPLD1Q9H336 500 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 GLOD4Q9HC38 313 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 CHRAC1Q9NRG0 131 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 DCTN4Q9UJW0 460 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 SOX13Q9UN79 622 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 GREB1Q4ZG55 1949 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 SCN5AQ14524 2016 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 AP3B1O00203 1094 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 TGDSO95455 350 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 VNN2O95498 520 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 MAP2K2P36507 400 aa25.02■■□□□ 1.6
VRK2-202ENST00000412104 PBX3P40426 434 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms