RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SPARCL1Q14515 664 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 ITIH4Q14624 930 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 ACBD5Q5T8D3 534 aaPredicted RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 ITPRIPL1Q6GPH6 555 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 RSPO2Q6UXX9 243 aaPredicted RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 RNF168Q8IYW5 571 aaPredicted RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 ZNF683Q8IZ20 524 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 MGARPQ8TDB4 240 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 FATE1Q969F0 183 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 OXNAD1Q96HP4 312 aaPredicted RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 TTPALQ9BTX7 342 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 SMYD2Q9NRG4 433 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 OLA1Q9NTK5 396 aaKnown RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 KLHL8Q9P2G9 620 aaPredicted RBP19.73■□□□□ 0.75
LMO2-203ENST00000411482 IKBKGQ9Y6K9 419 aa19.73■□□□□ 0.75
LMO2-203ENST00000411482 CXorf49A8MYA2 514 aaPredicted RBP19.72■□□□□ 0.75
LMO2-203ENST00000411482 TM9SF1O15321 606 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 MSI1O43347 362 aaKnown RBP19.72■□□□□ 0.75
LMO2-203ENST00000411482 SPAG7O75391 227 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 VIMP08670 466 aaKnown RBP19.72■□□□□ 0.75
LMO2-203ENST00000411482 TAC1P20366 129 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 RPA3P35244 121 aaPredicted RBP19.72■□□□□ 0.75
LMO2-203ENST00000411482 ZBTB17Q13105 803 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 NAB1Q13506 487 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 RTP2Q5QGT7 225 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 TTC39BQ5VTQ0 682 aaPredicted RBP19.72■□□□□ 0.75
LMO2-203ENST00000411482 SDHAF4Q5VUM1 108 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 CEP57Q86XR8 500 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 C4orf33Q8N1A6 199 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 TTC9BQ8N6N2 239 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 SAMD11Q96NU1 681 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 CASS4Q9NQ75 786 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.72■□□□□ 0.75
LMO2-203ENST00000411482 SEPT10Q9P0V9 454 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 GMIPQ9P107 970 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 HS3ST4Q9Y661 456 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 MYO16Q9Y6X6 1858 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 ATG2AQ2TAZ0 1938 aa19.72■□□□□ 0.75
LMO2-203ENST00000411482 TCP11X1B4DZS4 312 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 ZBTB24O43167 697 aaPredicted RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 PSMD3O43242 534 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 MT-ND3P03897 115 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 RB1P06400 928 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 SNRPAP09012 282 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 PGAM1P18669 254 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 FOXN2P32314 431 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PBX3P40426 434 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 ADGRE1Q14246 886 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 LGSNQ5TDP6 509 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 SLC8B1Q6J4K2 584 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 CCDC197Q8NCU1 140 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 BCL7CQ8WUZ0 217 aaPredicted RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 MTBPQ96DY7 904 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 MRRFQ96E11 262 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 IL12RB2Q99665 862 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 TTLL2Q9BWV7 592 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 SIK2Q9H0K1 926 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 MKS1Q9NXB0 559 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PPARGC1AQ9UBK2 798 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 BACE2Q9Y5Z0 518 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 MAD1L1Q9Y6D9 718 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 GREB1Q4ZG55 1949 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 IGLV3-10A0A075B6K4 115 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 H3BNC9 293 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 SNX3O60493 162 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PIAS1O75925 651 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 KRT37O76014 449 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 IGLV3-27P01718 113 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 CA4P22748 312 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 CTNNB1P35222 781 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 SERPINB9P50453 376 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 RPL10AP62906 217 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 TRIP4Q15650 581 aaPredicted RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 SLC1A5Q15758 541 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PDK4Q16654 411 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 RNF19BQ6ZMZ0 732 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 TIFABQ6ZNK6 161 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 TAS1R1Q7RTX1 841 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PPM1NQ8N819 430 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 RTL3Q8N8U3 475 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 FBXO22Q8NEZ5 403 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 B3GALT6Q96L58 329 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 PGLYRP2Q96PD5 576 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 CDX2Q99626 313 aaPredicted RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 MLPHQ9BV36 600 aaPredicted RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 CEP41Q9BYV8 373 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 CRISPLD1Q9H336 500 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 TLR8Q9NR97 1041 aaKnown RBP19.71■□□□□ 0.75
LMO2-203ENST00000411482 RWDD3Q9Y3V2 267 aa19.71■□□□□ 0.75
LMO2-203ENST00000411482 WDR27A2RRH5 827 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 E9PAM4 449 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 AP3B1O00203 1094 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 MAFKO60675 156 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 DHRS4L1P0CG22 281 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 SRGAP2BP0DMP2 458 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 CNTFP26441 200 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 GBP2P32456 591 aaPredicted RBP19.7■□□□□ 0.74
LMO2-203ENST00000411482 NEK3P51956 506 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 TBX4P57082 545 aa19.7■□□□□ 0.74
LMO2-203ENST00000411482 RING1Q06587 406 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms