RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 VPS52Q8N1B4 723 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 ETNPPLQ8TBG4 499 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 METTL6Q8TCB7 284 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 CNOT9Q92600 299 aaKnown RBP4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 RSRC1Q96IZ7 334 aaKnown RBP4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 CCDC17Q96LX7 622 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 TIMP4Q99727 224 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 ABHD14AQ9BUJ0 271 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 GATA5Q9BWX5 397 aaPredicted RBP4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 NUAK2Q9H093 628 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 USP44Q9H0E7 712 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 EPHX3Q9H6B9 360 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 TXNRD2Q9NNW7 524 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 CLIC5Q9NZA1 410 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 MPP6Q9NZW5 540 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 MAFFQ9ULX9 164 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 GPR34Q9UPC5 381 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 CAMK2AQ9UQM7 478 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 DTX4Q9Y2E6 619 aa4.41□□□□□ -1.7
RNU2-28P-201ENST00000410457 TMEM247A6NEH6 219 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 C16orf96A6NNT2 1141 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 PER2O15055 1255 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 PTP4A3O75365 173 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 GCATO75600 419 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 CCNDBP1O95273 360 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 HLA-DQA2P01906 255 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 URODP06132 367 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 CHRM5P08912 532 aaPredicted RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 ABCD1P33897 745 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 BSGP35613 385 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC14A1Q13336 389 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 TDGQ13569 410 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 IL13RA2Q14627 380 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 TOMM20Q15388 145 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 HECTD2Q5U5R9 776 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 PXKQ7Z7A4 578 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 RPAP2Q8IXW5 612 aaPredicted RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 PAQR4Q8N4S7 273 aaPredicted RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 OR52N4Q8NGI2 321 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZFPM2Q8WW38 1151 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 CELF1Q92879 486 aaKnown RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 CUL5Q93034 780 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 REPS1Q96D71 796 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 SAAL1Q96ER3 474 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 RANBP17Q9H2T7 1088 aaKnown RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 TTYH1Q9H313 450 aaPredicted RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 MUC13Q9H3R2 512 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 BRF2Q9HAW0 419 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 DIAPH3Q9NSV4 1193 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 TMEM248Q9NWD8 314 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 POLG2Q9UHN1 485 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 HEMK1Q9Y5R4 338 aaPredicted RBP4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 RPS6KL1Q9Y6S9 549 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 EMSYQ7Z589 1322 aa4.4□□□□□ -1.71
RNU2-28P-201ENST00000410457 A0A1W2PQM1 296 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 NPIPB15A6NHN6 443 aaPredicted RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 POC1B-GALNT4F8VUJ3 575 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 UBE2Q2LH0YL09 131 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 FIBPO43427 364 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 DOK2O60496 412 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 TIPRLO75663 272 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 COX7A2P14406 83 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 AKR1A1P14550 325 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ALOX12P18054 663 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 TYK2P29597 1187 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 MCM7P33993 719 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 IDUAP35475 653 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ARL3P36405 182 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 HARS2P49590 506 aaKnown RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 RARSP54136 660 aaKnown RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 EIF3BP55884 814 aaKnown RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 UFM1P61960 85 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 MAMLD1Q13495 774 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC18A3Q16572 532 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 PFKFB3Q16875 520 aaPredicted RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 AP5B1Q2VPB7 878 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ANXA2RQ3ZCQ2 193 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 TSTD2Q5T7W7 516 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 VWA5B1Q5TIE3 1220 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 NAPEPLDQ6IQ20 393 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC30A9Q6PML9 568 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 SERPINA13PQ6UXR4 307 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 RANBP10Q6VN20 620 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 RRM2BQ7LG56 351 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 NEK8Q86SG6 692 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 CCDC105Q8IYK2 499 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 CAGE1Q8TC20 777 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 KIF1BPQ96EK5 621 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF764Q96H86 408 aaPredicted RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 UROC1Q96N76 676 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 SERINC2Q96SA4 455 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF347Q96SE7 839 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 PRRX2Q99811 253 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 NUDT16L1Q9BRJ7 211 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms