RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C1QTNF3-AMACRE9PGA6 284 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 RNGTTO60942 597 aaKnown RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 LCP1P13796 627 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 PLA2G2AP14555 144 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 CD70P32970 193 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 RXRGP48443 463 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 NXPH1P58417 271 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 ECT2LQ008S8 904 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 PPP3CAQ08209 521 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 CCDC173Q0VFZ6 552 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 DNAJC3Q13217 504 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 MTA1Q13330 715 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.01□□□□□ -1.13
LSM5-202ENST00000409292 TBC1D25Q3MII6 688 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 DCAF17Q5H9S7 520 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 PRAMEF14Q5SWL7 426 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 FOXD4L5Q5VV16 416 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 FBXL19Q6PCT2 694 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 KIAA0907Q7Z7F0 614 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 SCML4Q8N228 414 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 GUF1Q8N442 669 aaKnown RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 FOXD4L4Q8WXT5 416 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 OR8D1Q8WZ84 308 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 WBP1Q96G27 269 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 KLHDC7BQ96G42 594 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 ZNF578Q96N58 590 aaPredicted RBP8.01□□□□□ -1.13
LSM5-202ENST00000409292 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 DYRK4Q9NR20 520 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 ERVW-1Q9UQF0 538 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 RAI2Q9Y5P3 530 aa8.01□□□□□ -1.13
LSM5-202ENST00000409292 DSPP15924 2871 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 NUMA1Q14980 2115 aa8□□□□□ -1.13
LSM5-202ENST00000409292 LAMA1P25391 3075 aa8□□□□□ -1.13
LSM5-202ENST00000409292 TTLL8A6PVC2 850 aa8□□□□□ -1.13
LSM5-202ENST00000409292 YJEFN3A6XGL0 299 aa8□□□□□ -1.13
LSM5-202ENST00000409292 E7ENQ6 273 aa8□□□□□ -1.13
LSM5-202ENST00000409292 F5H5T6 163 aa8□□□□□ -1.13
LSM5-202ENST00000409292 PRAMEF26H0Y7S4 382 aa8□□□□□ -1.13
LSM5-202ENST00000409292 MSI1O43347 362 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 KLRC4O43908 158 aa8□□□□□ -1.13
LSM5-202ENST00000409292 BRINP1O60477 761 aa8□□□□□ -1.13
LSM5-202ENST00000409292 LUC7L3O95232 432 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 MT-CO3P00414 261 aa8□□□□□ -1.13
LSM5-202ENST00000409292 LTFP02788 710 aa8□□□□□ -1.13
LSM5-202ENST00000409292 PRB1P04280 392 aa8□□□□□ -1.13
LSM5-202ENST00000409292 CENPBP07199 599 aaPredicted RBP8□□□□□ -1.13
LSM5-202ENST00000409292 ZSCAN22P10073 491 aaPredicted RBP8□□□□□ -1.13
LSM5-202ENST00000409292 ACP1P24666 158 aa8□□□□□ -1.13
LSM5-202ENST00000409292 RBMS1P29558 406 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 SYKP43405 635 aa8□□□□□ -1.13
LSM5-202ENST00000409292 DAOAP59103 153 aa8□□□□□ -1.13
LSM5-202ENST00000409292 CUL2Q13617 745 aa8□□□□□ -1.13
LSM5-202ENST00000409292 EDRF1Q3B7T1 1238 aa8□□□□□ -1.13
LSM5-202ENST00000409292 ACCSLQ4AC99 568 aa8□□□□□ -1.13
LSM5-202ENST00000409292 PITRM1Q5JRX3 1037 aa8□□□□□ -1.13
LSM5-202ENST00000409292 RABGAP1LQ5R372 815 aa8□□□□□ -1.13
LSM5-202ENST00000409292 TTC39BQ5VTQ0 682 aaPredicted RBP8□□□□□ -1.13
LSM5-202ENST00000409292 MSANTD2Q6P1R3 559 aa8□□□□□ -1.13
LSM5-202ENST00000409292 RFWD3Q6PCD5 774 aa8□□□□□ -1.13
LSM5-202ENST00000409292 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8□□□□□ -1.13
LSM5-202ENST00000409292 KDM7AQ6ZMT4 941 aa8□□□□□ -1.13
LSM5-202ENST00000409292 GRAMD1CQ8IYS0 662 aa8□□□□□ -1.13
LSM5-202ENST00000409292 ATP6V0D2Q8N8Y2 350 aa8□□□□□ -1.13
LSM5-202ENST00000409292 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
LSM5-202ENST00000409292 UBA3Q8TBC4 463 aa8□□□□□ -1.13
LSM5-202ENST00000409292 FAM149B1Q96BN6 582 aa8□□□□□ -1.13
LSM5-202ENST00000409292 CRELD1Q96HD1 420 aa8□□□□□ -1.13
LSM5-202ENST00000409292 HSFY1Q96LI6 401 aa8□□□□□ -1.13
LSM5-202ENST00000409292 SPAG5Q96R06 1193 aa8□□□□□ -1.13
LSM5-202ENST00000409292 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
LSM5-202ENST00000409292 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 GTPBP4Q9BZE4 634 aaKnown RBP8□□□□□ -1.13
LSM5-202ENST00000409292 USP29Q9HBJ7 922 aa8□□□□□ -1.13
LSM5-202ENST00000409292 THSD1Q9NS62 852 aa8□□□□□ -1.13
LSM5-202ENST00000409292 RMND1Q9NWS8 449 aa8□□□□□ -1.13
LSM5-202ENST00000409292 NCKIPSDQ9NZQ3 722 aa8□□□□□ -1.13
LSM5-202ENST00000409292 SLC25A13Q9UJS0 675 aa8□□□□□ -1.13
LSM5-202ENST00000409292 TLR6Q9Y2C9 796 aa8□□□□□ -1.13
LSM5-202ENST00000409292 SLCO1B1Q9Y6L6 691 aa8□□□□□ -1.13
LSM5-202ENST00000409292 COL5A1P20908 1838 aaPredicted RBP8□□□□□ -1.13
LSM5-202ENST00000409292 A0A1W2PR77 199 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 SPINT1O43278 529 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 TLX3O43711 291 aaPredicted RBP7.99□□□□□ -1.13
LSM5-202ENST00000409292 FLNBO75369 2602 aaKnown RBP7.99□□□□□ -1.13
LSM5-202ENST00000409292 RHOBTB3O94955 611 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 MOCS2O96007 188 aaPredicted RBP7.99□□□□□ -1.13
LSM5-202ENST00000409292 F13A1P00488 732 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 PAEPP09466 180 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 SLC2A3P11169 496 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 CMA1P23946 247 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 AKT2P31751 481 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ACADSBP45954 432 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ADPRHP54922 357 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 TLE3Q04726 772 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ZNF211Q13398 564 aaPredicted RBP7.99□□□□□ -1.13
LSM5-202ENST00000409292 MS4A13Q5J8X5 152 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 KCNT1Q5JUK3 1230 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms