RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TACR2P21452 398 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 GPR17Q13304 367 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 FAM83EQ2M2I3 478 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 TPGS2Q68CL5 300 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 DUPD1Q68J44 220 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 GLT6D1Q7Z4J2 308 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 ZNF557Q8N988 423 aaPredicted RBP9.28□□□□□ -0.92
LIG4-202ENST00000405925 AENQ8WTP8 325 aaKnown RBP9.28□□□□□ -0.92
LIG4-202ENST00000405925 C2orf15Q8WU43 125 aaKnown RBP9.28□□□□□ -0.92
LIG4-202ENST00000405925 SUSD6Q92537 303 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 PPP1R36Q96LQ0 422 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 FOPNLQ96NB1 174 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 FAM167BQ9BTA0 163 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 DRC3Q9H069 523 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 SAGE1Q9NXZ1 904 aa9.28□□□□□ -0.92
LIG4-202ENST00000405925 RCOR3Q9P2K3 495 aaPredicted RBP9.28□□□□□ -0.92
LIG4-202ENST00000405925 HEATR9A2RTY3 570 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 E9PAM4 449 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 IRAK2O43187 625 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 CLDN11O75508 207 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 PIAS1O75925 651 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 DDHD2O94830 711 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 PCDH8O95206 1070 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 MYL2P10916 166 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 GJA1P17302 382 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 SERPINA4P29622 427 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 L1CAMP32004 1257 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 NPY2RP49146 381 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 CYP4F8P98187 520 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 POM121L1PQ3SYA9 428 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 KCNMB4Q86W47 210 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 CIR1Q86X95 450 aaPredicted RBP9.27□□□□□ -0.92
LIG4-202ENST00000405925 LRRC49Q8IUZ0 686 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 DDIASQ8IXT1 998 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 IGSF21Q96ID5 467 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 TMEM209Q96SK2 561 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 ZDHHC6Q9H6R6 413 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 SLC24A2Q9UI40 661 aa9.27□□□□□ -0.92
LIG4-202ENST00000405925 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 MAGEB16A2A368 324 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 MTMR11A4FU01 709 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 KCNU1A8MYU2 1149 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SUPT3HB4E1H0 165 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 NEDD8-MDP1E9PL57 170 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 CHADO15335 359 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 CFLARO15519 480 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 ACSL4O60488 711 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SUPT3HO75486 399 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 DCTN3O75935 186 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 STMN1P16949 149 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 ABCG1P45844 678 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SEC24CP53992 1094 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 AUHQ13825 339 aaKnown RBP9.27□□□□□ -0.93
LIG4-202ENST00000405925 SERPINA13PQ6UXR4 307 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
LIG4-202ENST00000405925 CNPY4Q8N129 248 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 TSSK1BQ9BXA7 367 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 PRKD2Q9BZL6 878 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 CD274Q9NZQ7 290 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SUN2Q9UH99 717 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 VPS26AO75436 327 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 BANF1O75531 89 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 LUC7L3O95232 432 aaKnown RBP9.27□□□□□ -0.93
LIG4-202ENST00000405925 TRIM16O95361 564 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 IL1R2P27930 398 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 GP5P40197 560 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SERPINH1P50454 418 aaKnown RBP9.27□□□□□ -0.93
LIG4-202ENST00000405925 HDAC4P56524 1084 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 OGDHQ02218 1023 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 PTP4A2Q12974 167 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 TTLL9Q3SXZ7 439 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 ATAT1Q5SQI0 421 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 PCDH19Q8TAB3 1148 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 SLC9A7Q96T83 725 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 UNKQ9C0B0 810 aaKnown RBP9.27□□□□□ -0.93
LIG4-202ENST00000405925 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 PIGVQ9NUD9 493 aa9.27□□□□□ -0.93
LIG4-202ENST00000405925 MGEA5O60502 916 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 RHOQP17081 205 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 PTPN2P17706 415 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 PGAM1P18669 254 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 LSP1P33241 339 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 AFF1P51825 1210 aaKnown RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 DRG2P55039 364 aaKnown RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 TRIP4Q15650 581 aaPredicted RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 ZNF461Q8TAF7 563 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 LRRC37BQ96QE4 947 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 RAB3IPQ96QF0 476 aaPredicted RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 GPR88Q9GZN0 384 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 TMBIM4Q9HC24 238 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 PHIPQ8WWQ0 1821 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 NVLO15381 856 aaKnown RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 CD151P48509 253 aa9.26□□□□□ -0.93
LIG4-202ENST00000405925 SNRPD1P62314 119 aaKnown RBP9.26□□□□□ -0.93
LIG4-202ENST00000405925 XRCC4Q13426 336 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms