RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 OR7D4Q8NG98 312 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 RBM41Q96IZ5 413 aaKnown RBP30.08■■■□□ 2.41
USP42-202ENST00000404008 RNF157Q96PX1 679 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 MAGEH1Q9H213 219 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 C11orf16Q9NQ32 467 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 VPS28Q9UK41 221 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 MFHAS1Q9Y4C4 1052 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 CUL9Q8IWT3 2517 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 ATG2BQ96BY7 2078 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 NUP205Q92621 2012 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 CDKN2BP42772 138 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 RPS9P46781 194 aaKnown RBP30.07■■■□□ 2.4
USP42-202ENST00000404008 NUMBP49757 651 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 NDST2P52849 883 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 EMC10Q5UCC4 262 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 TMCO3Q6UWJ1 677 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 SPOCD1Q6ZMY3 1216 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 PQLC3Q8N755 202 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 CCDC26Q8TAB7 109 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 KCNV2Q8TDN2 545 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 ARHGEF2Q92974 986 aaKnown RBP30.07■■■□□ 2.4
USP42-202ENST00000404008 PSMB7Q99436 277 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 LRRC19Q9H756 370 aa30.07■■■□□ 2.4
USP42-202ENST00000404008 PI15O43692 258 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 DCNP07585 359 aaKnown RBP30.06■■■□□ 2.4
USP42-202ENST00000404008 ETFBP38117 255 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 YBEYP58557 167 aaPredicted RBP30.06■■■□□ 2.4
USP42-202ENST00000404008 POLD3Q15054 466 aaPredicted RBP30.06■■■□□ 2.4
USP42-202ENST00000404008 PARP15Q460N3 678 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 HS1BP3Q53T59 392 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 AFMIDQ63HM1 303 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 Q6ZS52 159 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 LZTR1Q8N653 840 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 USP33Q8TEY7 942 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 UCMAQ8WVF2 138 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 SORCS1Q8WY21 1168 aa30.06■■■□□ 2.4
USP42-202ENST00000404008 FAM86C2PA6NEL3 165 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 ATP5BP06576 529 aaKnown RBP30.05■■■□□ 2.4
USP42-202ENST00000404008 ACVRL1P37023 503 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 MRPS21P82921 87 aaKnown RBP30.05■■■□□ 2.4
USP42-202ENST00000404008 C2orf27AQ580R0 203 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 EGFLAMQ63HQ2 1017 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 NCBP2-AS2Q69YL0 99 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 CCDC50Q8IVM0 306 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 ZNF513Q8N8E2 541 aaPredicted RBP30.05■■■□□ 2.4
USP42-202ENST00000404008 DCAF4L2Q8NA75 395 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 ACE2Q9BYF1 805 aaPredicted RBP30.05■■■□□ 2.4
USP42-202ENST00000404008 DLGAP2Q9P1A6 1054 aa30.05■■■□□ 2.4
USP42-202ENST00000404008 RASA4BC9J798 803 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 RASA4O43374 803 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 KIF5CO60282 957 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 ASLP04424 464 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 DLDP09622 509 aaKnown RBP30.04■■■□□ 2.4
USP42-202ENST00000404008 HNRNPLP14866 589 aaKnown RBP eCLIP30.04■■■□□ 2.4
USP42-202ENST00000404008 TIE1P35590 1138 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 CTSOP43234 321 aaPredicted RBP30.04■■■□□ 2.4
USP42-202ENST00000404008 COPS2P61201 443 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 SULT2A1Q06520 285 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 TFDP3Q5H9I0 405 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 ARHGAP12Q8IWW6 846 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 FBXL6Q8N531 539 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 RPLP0P6Q8NHW5 317 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 CYB5D2Q8WUJ1 264 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 CELF6Q96J87 481 aaKnown RBP30.04■■■□□ 2.4
USP42-202ENST00000404008 SPON2Q9BUD6 331 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 C2orf49Q9BVC5 232 aaPredicted RBP30.04■■■□□ 2.4
USP42-202ENST00000404008 CHRDQ9H2X0 955 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 ATP13A1Q9HD20 1204 aa30.04■■■□□ 2.4
USP42-202ENST00000404008 MYO18AQ92614 2054 aaKnown RBP30.04■■■□□ 2.4
USP42-202ENST00000404008 SERPINB6P35237 376 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 ECT2LQ008S8 904 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 PAFAH1B3Q15102 231 aaKnown RBP30.03■■■□□ 2.4
USP42-202ENST00000404008 PTPRNQ16849 979 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 SLC9A4Q6AI14 798 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 IL31Q6EBC2 164 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 ACDQ96AP0 544 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 HMCESQ96FZ2 354 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 MAK16Q9BXY0 300 aaKnown RBP30.03■■■□□ 2.4
USP42-202ENST00000404008 SLC39A8Q9C0K1 460 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 PRDM16Q9HAZ2 1276 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 ZDHHC4Q9NPG8 344 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 THAP10Q9P2Z0 257 aaPredicted RBP30.03■■■□□ 2.4
USP42-202ENST00000404008 VPS51Q9UID3 782 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 KMT2EQ8IZD2 1858 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 hCG_1818297A0A087WSY0 165 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 PYGMP11217 842 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 GLDCP23378 1020 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 MAGEA9P43362 315 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 DNA2P51530 1060 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 GAS6Q14393 721 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 E2F5Q15329 346 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 RPS6KA1Q15418 735 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 PPP2R5EQ16537 467 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 ZNF569Q5MCW4 686 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 DCAF12L1Q5VU92 463 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 RFX6Q8HWS3 928 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 IL17RCQ8NAC3 791 aa30.03■■■□□ 2.4
USP42-202ENST00000404008 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.03■■■□□ 2.4
USP42-202ENST00000404008 TRIM44Q96DX7 344 aaPredicted RBP30.03■■■□□ 2.4
USP42-202ENST00000404008 ERVW-1Q9UQF0 538 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms