RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SAE1Q9UBE0 346 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 NYNRINQ9P2P1 1898 aaKnown RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 KCNK3O14649 394 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 GLDCP23378 1020 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 TARSP26639 723 aaKnown RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 COPS2P61201 443 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 POLD3Q15054 466 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 CCDC117Q8IWD4 279 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 CCDC33Q8N5R6 958 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 ARHGEF2Q92974 986 aaKnown RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 SHDQ96IW2 340 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 MAK16Q9BXY0 300 aaKnown RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 OSBPL8Q9BZF1 889 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 ZDHHC4Q9NPG8 344 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
HMGA1-204ENST00000401473 SHROOM3Q8TF72 1996 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 CACNA1IQ9P0X4 2223 aa16.34■□□□□ 0.21
HMGA1-204ENST00000401473 DLL1O00548 723 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 CST8O60676 142 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 RAMP2O60895 175 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 CHRNB1P11230 501 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 CTSOP43234 321 aaPredicted RBP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 DYNLT1P63172 113 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 GBE1Q04446 702 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 SLC12A1Q13621 1099 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 PAFAH1B3Q15102 231 aaKnown RBP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 PITRM1Q5JRX3 1037 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 C1orf228Q6PIY5 440 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 NPNTQ6UXI9 565 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 NYAP1Q6ZVC0 841 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 RFX6Q8HWS3 928 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF557Q8N988 423 aaPredicted RBP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 ACE2Q9BYF1 805 aaPredicted RBP16.33■□□□□ 0.21
HMGA1-204ENST00000401473 MUC3BQ9H195 1237 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 MAGEH1Q9H213 219 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 ELOVL2Q9NXB9 296 aa16.33■□□□□ 0.21
HMGA1-204ENST00000401473 FAM170BA6NMN3 283 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 PI15O43692 258 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 SNAP91O60641 907 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 APODP05090 189 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 DRD1P21728 446 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 KIR2DL1P43626 348 aaPredicted RBP16.33■□□□□ 0.2
HMGA1-204ENST00000401473 NDST2P52849 883 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 ETF1P62495 437 aaKnown RBP16.33■□□□□ 0.2
HMGA1-204ENST00000401473 PPP2R5EQ16537 467 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 MBLAC2Q68D91 279 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.2
HMGA1-204ENST00000401473 AHI1Q8N157 1196 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 FLCNQ8NFG4 579 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 TTC17Q96AE7 1141 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 HMCESQ96FZ2 354 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 SPON2Q9BUD6 331 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 CARD9Q9H257 536 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 LTB4R2Q9NPC1 389 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 DTLQ9NZJ0 730 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 VPS28Q9UK41 221 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 STARD13Q9Y3M8 1113 aa16.33■□□□□ 0.2
HMGA1-204ENST00000401473 TCRBV7S2A1N4TA0A589 114 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 RASA4BC9J798 803 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 RASA4O43374 803 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 MFSD11O43934 449 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 ZMPSTE24O75844 475 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 MT-CO1P00395 513 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 TNFRSF4P43489 277 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
HMGA1-204ENST00000401473 YBEYP58557 167 aaPredicted RBP16.32■□□□□ 0.2
HMGA1-204ENST00000401473 UBXN2BQ14CS0 331 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF783Q6ZMS7 281 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 ARHGAP36Q6ZRI8 547 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 SUGP1Q8IWZ8 645 aaKnown RBP16.32■□□□□ 0.2
HMGA1-204ENST00000401473 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 CYB5D2Q8WUJ1 264 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
HMGA1-204ENST00000401473 CIPCQ9C0C6 399 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 DONSONQ9NYP3 566 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 EFR3BQ9Y2G0 817 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 ACTL7AQ9Y615 435 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 MYO15AQ9UKN7 3530 aa16.32■□□□□ 0.2
HMGA1-204ENST00000401473 STK25O00506 426 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 APOL1O14791 398 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 CD160O95971 181 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PTPN7P35236 360 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 OXCT1P55809 520 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 SERINC3Q13530 473 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PTPRNQ16849 979 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PARP15Q460N3 678 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PREPLQ4J6C6 727 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 IL31Q6EBC2 164 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PBXIP1Q96AQ6 731 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 MYO19Q96H55 970 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms