RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 BTBD8Q5XKL5 378 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 HEATR6Q6AI08 1181 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 RPUSD3Q6P087 351 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM228AQ86W67 206 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 RHPN2Q8IUC4 686 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DENND6AQ8IWF6 608 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 METTL13Q8N6R0 699 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GLIS3Q8NEA6 775 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CLHC1Q8NHS4 586 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 RAD51AP1Q96B01 352 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CCDC74BQ96LY2 380 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 LENG8Q96PV6 779 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 FRMD8P1Q9BZ68 369 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ZBTB21Q9ULJ3 1066 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 SPATA2Q9UM82 520 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 POTEB3A0JP26 581 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GPR89AB7ZAQ6 455 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ZBTB5O15062 677 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 NDUFA2O43678 99 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 RBBP9O75884 186 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 UFL1O94874 794 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 HLA-DOAP06340 250 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GPR89BP0CG08 455 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ITGA2P17301 1181 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GJA1P17302 382 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 VEGFBP49765 207 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ALDH5A1P51649 535 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 COPS2P61201 443 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 LIPEQ05469 1076 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF844Q08AG5 666 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CCINQ13939 588 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 MFSD14BQ5SR56 506 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 POTEBQ6S5H4 581 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ISLR2Q6UXK2 745 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF571Q7Z3V5 609 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ASPGQ86U10 573 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 HEATR4Q86WZ0 1026 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ANKRD52Q8NB46 1076 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 OR9A1PQ8NGU1 263 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 PTCD2Q8WV60 388 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GCNT4Q9P109 453 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GMEB2Q9UKD1 530 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 NAV1Q8NEY1 1877 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 MIF4GDA9UHW6 222 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CENPBD1B2RD01 187 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DAPK3O43293 454 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 MAFKO60675 156 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CDC123O75794 336 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DDNO94850 711 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 KRT75O95678 551 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ANXA6P08133 673 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GSTM1P09488 218 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 TIMP2P16035 220 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ITGAXP20702 1163 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CCR1P32246 355 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DRG2P55039 364 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 SRP54P61011 504 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 MAGOHP61326 146 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 HPCAP84074 193 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 HTD2P86397 168 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CACNB1Q02641 598 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 ACCSLQ4AC99 568 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DENND2CQ68D51 928 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 DPP8Q6V1X1 898 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 PRR18Q8N4B5 295 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 CCDC197Q8NCU1 140 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GALNT11Q8NCW6 608 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 METTL6Q8TCB7 284 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 MAGOHBQ96A72 148 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 LRRC39Q96DD0 335 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 POLD4Q9HCU8 107 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM8A1Q9UBU6 413 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 GGA1Q9UJY5 639 aa6.73□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SEC22BO75396 215 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC9A1P19634 815 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ATP12AP54707 1039 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 NRLP54845 237 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 EIF6P56537 245 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GPX6P59796 221 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PRAMEP78395 509 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 KRT17Q04695 432 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TRPM8Q7Z2W7 1104 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TMPRSS9Q7Z410 1059 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 R3HCC1LQ7Z5L2 792 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 IRF2BP2Q7Z5L9 587 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 KCTD20Q7Z5Y7 419 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ADGRF4Q8IZF3 695 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC44A1Q8WWI5 657 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RFFLQ8WZ73 363 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SEC16BQ96JE7 1060 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms