RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PLTPP55058 493 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 POLD3Q15054 466 aaPredicted RBP28.15■■■□□ 2.1
CPNE1-203ENST00000397442 CXorf57Q6NSI4 855 aaKnown RBP28.15■■■□□ 2.1
CPNE1-203ENST00000397442 CELF5Q8N6W0 485 aaKnown RBP28.15■■■□□ 2.1
CPNE1-203ENST00000397442 LRCH3Q96II8 777 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 SPATA13Q96N96 652 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 ASB16Q96NS5 453 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 KIF9Q9HAQ2 790 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 GDE1Q9NZC3 331 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 PAK5Q9P286 719 aa28.15■■■□□ 2.1
CPNE1-203ENST00000397442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ARHGAP42A6NI28 874 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ZNF189O75820 626 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 FAM153BP0C7A2 387 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 PTPN3P26045 913 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ITGA8P53708 1063 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ZNF177Q13360 481 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 FAM153CQ494X1 144 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ANKRD20A2Q5SQ80 823 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ANKRD20A1Q5TYW2 823 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 ANKRD20A3Q5VUR7 823 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 IZUMO3Q5VZ72 239 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 RNF43Q68DV7 783 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 RHBDF2Q6PJF5 856 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 SETD3Q86TU7 594 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 LRRC45Q96CN5 670 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 MSLNLQ96KJ4 702 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 CEP41Q9BYV8 373 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 SEPT10Q9P0V9 454 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 FAM153AQ9UHL3 310 aa28.14■■■□□ 2.1
CPNE1-203ENST00000397442 IPO11Q9UI26 975 aaKnown RBP28.14■■■□□ 2.1
CPNE1-203ENST00000397442 DOCK8Q8NF50 2099 aa28.14■■■□□ 2.09
CPNE1-203ENST00000397442 A0A0D9SEW6 157 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 MTSS1O43312 755 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 IGFBP4P22692 258 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ACVRL1P37023 503 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ZBTB17Q13105 803 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 CALCOCO2Q13137 446 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 SERINC3Q13530 473 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ATAT1Q5SQI0 421 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 MPP7Q5T2T1 576 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ZNF567Q8N184 647 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 TAB3Q8N5C8 712 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.13■■■□□ 2.093e-13■■■■■ 108.9
CPNE1-203ENST00000397442 ARHGEF2Q92974 986 aaKnown RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 LINC00597Q9H2U6 94 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ARGLU1Q9NWB6 273 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 PEX11BO96011 259 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 HOXD9P28356 352 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 VIPR2P41587 438 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 GNA12Q03113 381 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 MPPE1Q53F39 396 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 C6orf118Q5T5N4 469 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 RNASEH2BQ5TBB1 312 aaKnown RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 CES5AQ6NT32 575 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 HIBCHQ6NVY1 386 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 SMARCD2Q92925 531 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ZNF419Q96HQ0 510 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 FAM161BQ96MY7 647 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 FERMT1Q9BQL6 677 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 MAGEH1Q9H213 219 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 TPX2Q9ULW0 747 aaKnown RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 FARP1Q9Y4F1 1045 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-203ENST00000397442 C5orf42Q9H799 3197 aa28.13■■■□□ 2.09
CPNE1-203ENST00000397442 ILVBLA1L0T0 632 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 MATN3O15232 486 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 ERLIN1O75477 346 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 LUC7L3O95232 432 aaKnown RBP28.12■■■□□ 2.09
CPNE1-203ENST00000397442 ACTN2P35609 894 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 FSCBQ5H9T9 825 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 BEND6Q5SZJ8 279 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-203ENST00000397442 TPGS1Q6ZTW0 290 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 BBOF1Q8ND07 529 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 DDI1Q8WTU0 396 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 CPT1BQ92523 772 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 BHMTQ93088 406 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 PABPC5Q96DU9 382 aaKnown RBP28.12■■■□□ 2.09
CPNE1-203ENST00000397442 FAM129AQ9BZQ8 928 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 TBC1D14Q9P2M4 693 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 ANAPC5Q9UJX4 755 aa28.12■■■□□ 2.09
CPNE1-203ENST00000397442 TYW5A2RUC4 315 aaKnown RBP28.11■■■□□ 2.09
CPNE1-203ENST00000397442 J3KR12 359 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 OPHN1O60890 802 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 STK10O94804 968 aaKnown RBP28.11■■■□□ 2.09
CPNE1-203ENST00000397442 METTL18O95568 372 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 IFI35P80217 286 aaPredicted RBP28.11■■■□□ 2.09
CPNE1-203ENST00000397442 FYB2Q5VWT5 728 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 CARNMT1Q8N4J0 409 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 OR7D4Q8NG98 312 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 WFDC5Q8TCV5 224 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 FATE1Q969F0 183 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 TRPV4Q9HBA0 871 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 CDH7Q9ULB5 785 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 MYO18AQ92614 2054 aaKnown RBP28.11■■■□□ 2.09
CPNE1-203ENST00000397442 DENND4AQ7Z401 1863 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 MYOFQ9NZM1 2061 aa28.11■■■□□ 2.09
CPNE1-203ENST00000397442 RHOCP08134 193 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 CCNB1P14635 433 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 TEX44Q53QW1 395 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms