RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 EEF1DP3Q658K8 133 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 POTEHQ6S545 545 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 NAPRTQ6XQN6 538 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 LILRA2Q8N149 483 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 PLD6Q8N2A8 252 aaKnown RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 LRRC43Q8N309 656 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 DCLK2Q8N568 766 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 CEP41Q9BYV8 373 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 VPS33BQ9H267 617 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 COQ6Q9Y2Z9 468 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 KANSL1LA0AUZ9 987 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SH3PXD2BA1X283 911 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 B4GALT5O43286 388 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 F7P08709 466 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 OCM2P0CE71 109 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 OCMP0CE72 109 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PSMC3P17980 439 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 FGFR3P22607 806 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 EPHA3P29320 983 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MS4A2Q01362 244 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PFKPQ01813 784 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 STXBP2Q15833 593 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF423Q2M1K9 1284 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 DALRD3Q5D0E6 543 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PTAR1Q7Z6K3 402 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 COLGALT1Q8NBJ5 622 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 HTR3CQ8WXA8 447 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 QKIQ96PU8 341 aaKnown RBP eCLIP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CAAP1Q9H8G2 361 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SYBUQ9NX95 663 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SEPT10Q9P0V9 454 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MORF4L1Q9UBU8 362 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 COL11A2P13942 1736 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 FUOMA2VDF0 154 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 J3QRK9 145 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 K7EPI3 171 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 TRIM13O60858 407 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MAFO75444 373 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 FUCA1P04066 466 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CCDC130P13994 396 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ME2P23368 584 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 GLDCP23378 1020 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MPSTP25325 297 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 RCVRNP35243 200 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ABCG1P45844 678 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CLCN2P51788 898 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 NDST1P52848 882 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 NAB1Q13506 487 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 APOFQ13790 326 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CEACAM7Q14002 265 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 TARBP2Q15633 366 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 GOLGA7BQ2TAP0 167 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PIGGQ5H8A4 983 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 IER5Q5VY09 327 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 C12orf29Q8N999 325 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 NETO2Q8NC67 525 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PDCD6IPQ8WUM4 868 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 KBTBD7Q8WVZ9 684 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 RSPH1Q8WYR4 309 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 EME1Q96AY2 570 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 FBXL8Q96CD0 374 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MOCOSQ96EN8 888 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 TMA16Q96EY4 203 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 GMLQ99445 158 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SYT17Q9BSW7 474 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 HAUS8Q9BT25 410 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 NACA2Q9H009 215 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ILKAPQ9H0C8 392 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ARID2Q68CP9 1835 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 A0A0A0MRY4 1105 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 STX16-NPEPL1H3BU86 382 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MDM4O15151 490 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CHRNGP07510 517 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MLNP12872 115 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CYP3A5P20815 502 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ATXN1P54253 815 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 FSTL1Q12841 308 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PPP2R5DQ14738 602 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ADRM1Q16186 407 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 LSM12Q3MHD2 195 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 XKR5Q6UX68 686 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 UTS2BQ765I0 119 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM126BQ8IUX1 230 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 RP9Q8TA86 221 aaKnown RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 CERS2Q96G23 380 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SPATA13Q96N96 652 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PGLYRP2Q96PD5 576 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 PCYT2Q99447 389 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 LGMNQ99538 433 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 GATA5Q9BWX5 397 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 NUF2Q9BZD4 464 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms