RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MICALL2Q8IY33 904 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 PLD6Q8N2A8 252 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 NDRG1Q92597 394 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 EPS15L1Q9UBC2 864 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 TUBGCP4Q9UGJ1 667 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 ZNF638Q14966 1978 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 RGSL1A5PLK6 1076 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 ACKR2O00590 384 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 CAPNS1P04632 268 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 PDGFRBP09619 1106 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 VDRP11473 427 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 EPHA3P29320 983 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 ALDH3B2P48448 385 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 Q3C1V9 767 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 OLFML1Q6UWY5 402 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 CHERPQ8IWX8 916 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 TP53INP2Q8IXH6 220 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 OSBPL6Q9BZF3 934 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 CAAP1Q9H8G2 361 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 HSPA4LO95757 839 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 SAT1P21673 171 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 FUT4P22083 530 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 MXD4Q14582 209 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 METTL21CQ5VZV1 264 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 CATSPERGQ6ZRH7 1159 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 TMEM102Q8N9M5 508 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 MARK4Q96L34 752 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 KLHL32Q96NJ5 620 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 FERMT1Q9BQL6 677 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 SYBUQ9NX95 663 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 RNASEH2AO75792 299 aaKnown RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 H6PDO95479 791 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 AMHP03971 560 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 LCP1P13796 627 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 ZNF26P17031 533 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PROZP22891 400 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 GLDCP23378 1020 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PDK2Q15119 407 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 DHRS4L2Q6PKH6 230 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 CDKL3Q8IVW4 592 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 GIPC3Q8TF64 312 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PDCD6IPQ8WUM4 868 aaKnown RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 EME1Q96AY2 570 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 TCF7L2Q9NQB0 619 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 TXNDC16Q9P2K2 825 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PCDHB12Q9Y5F1 795 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 SCN1AP35498 2009 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PTPRFP10586 1907 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 C7orf72A4D263 438 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 GOLGA8TH3BQL2 631 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PPEF2O14830 753 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PAPSS1O43252 624 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 NAA20P61599 178 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 IRF9Q00978 393 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 PDAP1Q13442 181 aaKnown RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 BOLA3Q53S33 107 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 NAPRTQ6XQN6 538 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 NUF2Q9BZD4 464 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 WDR55Q9H6Y2 383 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 GBA2Q9HCG7 927 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 ZNHIT2Q9UHR6 403 aa24.48■■□□□ 1.51
CSNK1E-203ENST00000396832 ZNF189O75820 626 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 ENO3P13929 434 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 PORP16435 677 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 FAM131BQ86XD5 332 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 GCOM2Q9BZD3 368 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 AS3MTQ9HBK9 375 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 PFDN4Q9NQP4 134 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 INIPQ9NRY2 104 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 DTLQ9NZJ0 730 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 BARX2Q9UMQ3 279 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 AP4E1Q9UPM8 1137 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 HES2Q9Y543 173 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 ARHGEF37A1IGU5 675 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 SOWAHBA6NEL2 793 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 GABBR2O75899 941 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 PTPN1P18031 435 aaKnown RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 PHEXP78562 749 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 MBTD1Q05BQ5 628 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 MGAT5BQ3V5L5 792 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 TREML2Q5T2D2 321 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 COLGALT1Q8NBJ5 622 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 CCNYQ8ND76 341 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 DLG3Q92796 817 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 RCN3Q96D15 328 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 MRPL45Q9BRJ2 306 aaKnown RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 UNKQ9C0B0 810 aaKnown RBP24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 WDR37Q9Y2I8 494 aa24.47■■□□□ 1.51
CSNK1E-203ENST00000396832 STX16-NPEPL1H3BU86 382 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 MX2P20592 715 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 PSMB4P28070 264 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 CNKSR2Q8WXI2 1034 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 RSPH1Q8WYR4 309 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 KCTD15Q96SI1 283 aaPredicted RBP24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 VPS28Q9UK41 221 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 GINS2Q9Y248 185 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 SNX9Q9Y5X1 595 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 VTNP04004 478 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 ME2P23368 584 aa24.46■■□□□ 1.51
CSNK1E-203ENST00000396832 ADORA2BP29275 332 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms