RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CALB2P22676 271 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 YY1P25490 414 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 GTF2A1P52655 376 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 NRG1Q02297 640 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 YWHAHQ04917 246 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 DSC1Q08554 894 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 CDH17Q12864 832 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 TEDDM1Q5T9Z0 273 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 BTBD8Q5XKL5 378 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 SCD5Q86SK9 330 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 LONP2Q86WA8 852 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 ARID3BQ8IVW6 561 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 CNTD1Q8N815 330 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 ZIC5Q96T25 663 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 MCMBPQ9BTE3 642 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 WWP1Q9H0M0 922 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 TRMT13Q9NUP7 481 aaKnown RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 PAGE1O75459 146 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 CCR1P32246 355 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 SERPINB8P50452 374 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 CSE1LP55060 971 aaKnown RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 CERCAMQ5T4B2 595 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 FAM13CQ8NE31 585 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 IL12RB2Q99665 862 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 C20orf27Q9GZN8 174 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 CATSPERBQ9H7T0 1116 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 EBF2Q9HAK2 575 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 ALDH1A1P00352 501 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 TYK2P29597 1187 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 PCLAFQ15004 111 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 WASHC2DQ5SRD0 308 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 AFMIDQ63HM1 303 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 C16orf46Q6P387 395 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 STRA8Q7Z7C7 330 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 DCLK2Q8N568 766 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 SH3TC2Q8TF17 1288 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 CASP10Q92851 521 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 PRR11Q96HE9 360 aaPredicted RBP17.13■□□□□ 0.33
NUP50-202ENST00000396096 PPP1R2P1Q96PQ5 205 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 FCRL5Q96RD9 977 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 BTBD10Q9BSF8 475 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 ZNF395Q9H8N7 513 aaPredicted RBP17.13■□□□□ 0.33
NUP50-202ENST00000396096 SNX15Q9NRS6 342 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 IL1RAPL1Q9NZN1 696 aa17.13■□□□□ 0.33
NUP50-202ENST00000396096 AAR2Q9Y312 384 aaKnown RBP17.13■□□□□ 0.33
NUP50-202ENST00000396096 C2orf71A6NGG8 1288 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 KCNU1A8MYU2 1149 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 F8W810 466 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 OAZ2O95190 189 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 SERPINE1P05121 402 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 MPOP05164 745 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 GRIK1P39086 918 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 CCDC153Q494R4 210 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 RWDD4Q6NW29 188 aaKnown RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 GLB1LQ6UWU2 654 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 CCDC117Q8IWD4 279 aaPredicted RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 ATPAF2Q8N5M1 289 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 MIPEPQ99797 713 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 STN1Q9H668 368 aaKnown RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 TIMM44O43615 452 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 B4GALT3O60512 393 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 MAFKO60675 156 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 GRK2P25098 689 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 CDK7P50613 346 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 RPL10AP62906 217 aaKnown RBP17.12■□□□□ 0.33
NUP50-202ENST00000396096 FAM189BP81408 668 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 E2F5Q15329 346 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 CLEC14AQ86T13 490 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 KCNMB4Q86W47 210 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 LRRC49Q8IUZ0 686 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 OR6Y1Q8NGX8 325 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 PPP1R14CQ8TAE6 165 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 MFSD3Q96ES6 412 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 FUBP3Q96I24 572 aaKnown RBP eCLIP17.12■□□□□ 0.33
NUP50-202ENST00000396096 PGLYRP2Q96PD5 576 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 SIK2Q9H0K1 926 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 NSMCE4AQ9NXX6 385 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 TMEM216Q9P0N5 145 aa17.12■□□□□ 0.33
NUP50-202ENST00000396096 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 MATN3O15232 486 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ATP9BO43861 1147 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 ANXA9O76027 345 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 DDHD2O94830 711 aa17.11■□□□□ 0.33
NUP50-202ENST00000396096 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms